SimpleSearch - Line and FST details


Line specific information

 
Line ID 626H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N460086)
Segregation Analysis 50:39:30
Confirmed for Hit At2g17230
Parent of DUPLO pair none
Parent of pair(s) 2853, 10818

Gene hit At4g13120

 
Sequence (A. th genome BLAST matches underlined) 
>16-K022321-022-626-H02-8409
TTCGTGCTTCAAAAAGGATTCTAAAAAGGCTATGGGAGCCTACCTATACTGAGCCAAAAG
CCAAAGTAAACCCGAAGTTCAACTTCGGGTTCGGTCCGGTTCGGTTCGGCTAAATTTATA
GTGATCATTATCAAAGTAGGAGAAAGGAACCCAACCCGAAGTAGATAATCCCTTTCCTTT
TGCATCTCCTTGCAGTCCAGTAACTCTTCTATGGGATCCTCCCTATAATGAGCGTGTCCC
ATGTAACCCGGTAAAGCAAATGGATAAACACAAACCTCGGGACATTGTTTTCCCGATTGA
CCAACCCAAGCGTAAGGCATAGTGTAATCAACC
GenBank Accession BX657855 [GenBank]
Graphic View Graphic view of gene At4g13120
Predicted Position of Insertion Chr4:7646587 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) F17N18
Hit Gene Code At4g13120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At2g17230

 
Sequence (A. th genome BLAST matches underlined) 
>16-K022317-022-626-H02-8409
TCATTGAATATATCCTGATAGATTGTCCTATGTATATCACGCATATTGTCTAACTCGTTA
CCCTATGGGATCCTCCCTATAGTGAGACACTATGATCTCGACGATACCGTTTATGAGGGA
GAGTAGATGCCCTCTCTGATCACTCTGACGAGAGAACTCCTTAGGTTTTACAAGTGTTAC
TTTATTTTATTTGGGGAGTTCCTACAAATTTATGATTTATCGAATGCTTTTACCCTGTTT
TTCTGGTCGCTTCGATCGAAGCCCGGATTTCTCCCGGCTCCTTTTTGGCTCAGTACCCCG
GATTGGTAATGTATAAGAGCTTTTATCGGACCCTTGTTTTCCCGATTGACAACCACTTCA
TACGGCTTAGTGTATCCGACCCTCCGAGCCAACATCAACCAACCGAGATAGGGGGAGGAC
ACAAAAATATACATACAAC
GenBank Accession FR813547 [GenBank]
Graphic View Graphic view of gene At2g17230
Predicted Position of Insertion Chr2:7494953 - go to primer design
BLAST e Value 0.054
Hit Clone Code (BAC ID) T23A1
Hit Gene Code At2g17230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EXORDIUM like 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37