SimpleSearch - Line and FST details


Line specific information

 
Line ID 627A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N460098)
Segregation Analysis 50:41:36
Confirmed for Hit At1g09550
Parent of DUPLO pair none
Parent of pair(s) 5662, 5671, 5703, 5708, 88086, 88093

Gene hit At1g09550

 
Sequence (A. th genome BLAST matches underlined) 
>09-K022015-022-627-A02-8409
TTTGGAGGATATCCGGAATNAGCCATTTCAGTTGAATAGAGCAAGAAATCTCCATGTGTT
CACGAAGACAGGCCATCCACCTATGATGTGAATGGTCCCTAATGTGCGTAGTTTTGGTTC
CCAATCTATTGCTTTGCGTTCCCAATGTAATCCTCCCTATACTCGAGGTATCTGCTATCC
ATATGAACTATAGCTTTTCTACCTTTTTACCCTGCTGGTGTCTGTTACCCTATCCTTTAC
TCACTCCTCCGTGAACTGAGGTGAGTCCTACCATCAGAACGTTTGCATTTGTTCCATTGG
ACTCATTGAAGGTTTTCATTTCCCCATGTGCAAAAATGCTTGAACAAAATGACTCCTGCA
AAACTACTCCAACCCCAATACAAAAGCGTTTTCATTTCTCCTCTTAATGAAATTTGAATG
AAATGATTATGGAGACGTACTATGGGATCCTCCCTATAATGA
GenBank Accession BX657875 [GenBank]
Graphic View Graphic view of gene At1g09550
Predicted Position of Insertion Chr1:3091917 - go to primer design
BLAST e Value 2e-72
Hit Clone Code (BAC ID) F14J9
Hit Gene Code At1g09550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectinacetylesterase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657875 [GenBank]


Last Updated on 10.06.2021 13:37