SimpleSearch - Line and FST details


Line specific information

 
Line ID 627C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N460121)
Segregation Analysis 50:39:30
Confirmed for Hit At3g55090
Parent of DUPLO pair none
Parent of pair(s) 82999, 83005, 83010, 83014, 83017, 83019, 83021

Gene hit At1g05620

 
Sequence (A. th genome BLAST matches underlined) 
>03-K022015-022-627-C01-8409
TCAAAGCCCTAATAACGAGTTGAAAAACCCTTATAGGCTTATAGCTAAACCTTAAACCCT
AATCTTTTGTTTTGCTAACACTATGGGATCCTCCCTATAGTGAGANNTATGGNATCCTCC
CTAT
GenBank Accession BX657890 [GenBank]
Graphic View Graphic view of gene At1g05620
Predicted Position of Insertion Chr1:1678639 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) F3F20
Hit Gene Code At1g05620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation uridine-ribohydrolase 2
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At3g55090

 
Sequence (A. th genome BLAST matches underlined) 
>03-K023219-022-627-C01-8409
AGAGCATACGGAGCAGGCGTAGAACATTGTTGACATTGGGAATGCAAACAACCCTAACCG
CTCTTGAACTCCTTTTGGTGAATTATCCAATCGCCAGAATACGGTGGCTAAGATGAATCC
GGTGACGATTACGGTGGCTAATCGCATTCCGAGTAGCTCCGGTTGTCGTCGGGAGTTGAG
GATTGAGCGTCTGGTGAGAGTTTTGACTC
GenBank Accession BX892637 [GenBank]
Graphic View Graphic view of gene At3g55090
Predicted Position of Insertion Chr3:20416942 - go to primer design
BLAST e Value 5e-95
Hit Clone Code (BAC ID) T15C9
Hit Gene Code At3g55090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC-2 type transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37