SimpleSearch - Line and FST details


Line specific information

 
Line ID 627C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N460123)
Segregation Analysis 50:28:21
Confirmed for Hit At5g66670
Parent of DUPLO pair none
Parent of pair(s) 9159, 11530, 72431

Gene hit At5g66670

 
Sequence (A. th genome BLAST matches underlined) 
>19-K022015-022-627-C03-8409
NNNNGGTGGTATTCGGACATGAGCCTTTACATTGAATATATCCTGGTACTTATTAATTTT
CAAGTAACTATGGGATCCTCCCTATAGTGAGACTAAGTTCTCCACCCTTTGGACATGAAT
GTAGATTCCCCATGGTGCTCCTCCCTATTGAGAGTTCTCTTACTCTTCGCTTCCGAAAGT
AAAACCTGCTCTTCAGAGACTCACTTGTACTGAGTCACGAAATCTCCTTCTAAAGGGTCT
CCCATGGCTTTACACTTGTTCATCTCCTCCAAGGTTTTCACATACTTCTTCTTCTTACTC
TCTCATAGATCCGTATCCACCGGTTCTGTCTCACACTGTTTCACCGCCAATCGAATGATA
TATCTGACGTAATTCTGCTTACATGGAGCATTTCTCGACGGTATTGCAGAAGTCCAAGGT
CTTACAGGTACTTTTGAAATAGACATCAAGCAAAGCCTTGAGATCATTGTTCTTCAAAAC
ATCTTCTTTGCTTTCAATGATGACTCTTACTGTATCATGGTTTACTTCCAGATAATATCA
ATATACCTCCATGAATGAATCCATGTTTAAA
GenBank Accession BX657891 [GenBank]
Graphic View Graphic view of gene At5g66670
Predicted Position of Insertion Chr5:26611947 - go to primer design
BLAST e Value 1e-132
Hit Clone Code (BAC ID) MSN2
Hit Gene Code At5g66670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pectinesterase, putative (DUF677)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37