SimpleSearch - Line and FST details
Line specific information
| Line ID | 629D02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N460326) |
| Segregation Analysis | 50:11:6 |
| Confirmed for Hit | At1g11460 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 88888, 88894, 88895, 88897 |
| Note |
Gene hit At1g11460
| Sequence (A. th genome BLAST matches underlined) | >12-K113865-0022-629-D02-8409 GTCCAAGCAGGAATGATAAAAGTGATGGGAACTATTATATGTATAAGTGGAGCTTTGTTC TGAACATTTTACAAAGGCCCTCAGATATCAAACTCTCACTCTCACCAAGAGGCTCTTCCT CACAACAACAACAGCGATCACAACACAAATAATTGGCTTCTTGGATGTCTCTACTTAACC ATAGGAACCGTGTTGATATCTCTATGGATTTTGTTTCAAGGGACTTTAAGCATCAAGTAC CCTTGCAAATTCTCAAGCACTTGTCTCATGTCAATTTTCGCAGCTTTTCAATGTGCTCTA TTGAGTCTTTACAAGAGTAGAGATGTTAAAGATTGGATCATCGATGATAGATTTGTGATC GGTGTCATCGTATATGCTGTAAGTTCTAACCTGCCCGGCCGC |
| GenBank Accession | HE664842 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:3858249 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T23J18 |
| Hit Gene Code | At1g11460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nodulin MtN21 /EamA-like transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g13590
| Sequence (A. th genome BLAST matches underlined) | >12-K022080-022-629-D02-8409 CATCCTCCCTAGAGTGAGTCGAATTACTCATGGGATCCTCCTTATAGTGGGCTACACTGA ATTGGTAGCTCAATAAACCTATGGGATCCTCCCTATAGTGAGACTATTCGAACCTCCATA TAGTGAGTGGCTCAGCCTTTATTGATAGGGGGGCCACTGTCTTCAAAATACCAAATGAGG GACTATTTCCTTGGATGAATCTGCCAATACCCTCATGTTTCAATCCTTTAATACATAGCC CGATTGGAGAAACTTGAGTACTCTCTGTTGCCTGCCTAACACTCTCTTCAATGATTTCTG ACTTCCCAGTCCTAAGGTTAACTGACCACACATTCGCAGCTCTTGCCTCTAATGTGGGAG CTGGAAGAGAAGGA |
| GenBank Accession | BX658007 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:4377197 - go to primer design |
| BLAST e Value | 1e-101 |
| Hit Clone Code (BAC ID) | T6I14 |
| Hit Gene Code | At5g13590 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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