SimpleSearch - Line and FST details


Line specific information

 
Line ID 629D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N460327)
Segregation Analysis 50:11:10
Confirmed for Hit At3g22220
Parent of DUPLO pair 11703
Parent of pair(s) none

Gene hit At3g22220

 
Sequence (A. th genome BLAST matches underlined) 
>20-K022080-022-629-D03-8409
CACGCTACTAATAGCCACAGGAATCAAATTGTCCATATCTCGATCAACCTCAACATTAGC
CAAATCATTCCTCTCAAAAGCATTATTCTTTCTACTCCTATAAGTCCTCTGCTTCGTCCT
CCCAGTACTTTGACCCACTACGACATCCGAACTCGGCGATTTAAACCCGTTATTCACATC
AGAAGAAGCAGCAACCTGAGTCTCAACTTCACAAGGAGGGAAATAAGCTATAGGCAATGG
TTCAGGACTTGATTTACGTCTCTTCCTCTGACGTCTCACCGTACCATCAATACACTGCTG
CAAGAAAAGACGAACCTCATCAGGAACTTGATCACAGATAGTGCCTTGTCCTTTCTTGCC
AGCAAGATGTTCCTTAACCCTTGTAATACCACCTCCTTTAAACATCTTTCGACAGTAAAG
ACATCTCATCTGAACTCGATCTCCATATTTGTAAACTTCACAGTGTTTCCACGC
GenBank Accession BX658008 [GenBank]
Graphic View Graphic view of gene At3g22220
Predicted Position of Insertion Chr3:7841802 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MKA23
Hit Gene Code At3g22220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hAT transposon superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37