SimpleSearch - Line and FST details


Line specific information

 
Line ID 631E03
Vector Used pAC161
Line Availability available as T3 set from NASC (N460531)
Segregation Analysis 50:21:15
Confirmed for Hit At2g47320
Parent of DUPLO pair 12337
Parent of pair(s) none

Gene hit MAJ23

 
Sequence (A. th genome BLAST matches underlined) 
>21-K023206-022-631-E03-8409
ATTGAATATATGTTGGGATAACCTCCAATATATATAGGGTTCTAAACCAAACGTTCATAC
CATTTGTAAAACTGATGGCACTATGGGATCCTCCCTATAGGGAGTTATGGGATCCTCCCT
ATAGCGAGTCCTTGGGATCCTCCCTATAATAACGCTGCGGACATCTACTTTTTTGATTTG
AAAAAAATTGGTAGGGGGG
GenBank Accession BX892787 [GenBank]
Graphic View Graphic view of sequence BX892787 of line 631E03
Predicted Position of Insertion Chr5:3369688 - go to primer design
BLAST e Value 1e-21
Hit Clone Code (BAC ID) MAJ23
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g47320

 
Sequence (A. th genome BLAST matches underlined) 
>21-K022796-022-631-E03-8409
AGCCATTTACATTGAATATATCCTGAACAACGTCTCTATTGGCGAGATCATGTCCGTCAC
TTTGCTTCAAGACATGTAAAAGCTTTTTTACTTCTTGTCTCTCTCTCTTGTATGAAACTC
AAGTGATTTTTCTTGTGAATTTGAAACCCTTTTTATCATCTATTTTCCATATCATGTCTC
ATACGAAGAATTACATCCTAACAAGAAATGGAAAATTTATATATTCAAAGGCTGAAACGG
GAAAGGATAAAACAAATTATACCACATTCATTACCTTGTCGTGCAAAAC
GenBank Accession BX658082 [GenBank]
Graphic View Graphic view of gene At2g47320
Predicted Position of Insertion Chr2:19428799 - go to primer design
BLAST e Value 3e-127
Hit Clone Code (BAC ID) T8I13
Hit Gene Code At2g47320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37