SimpleSearch - Line and FST details


Line specific information

 
Line ID 633A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N460680)
Segregation Analysis 50:8:7
Confirmed for Hit At1g14590
Parent of DUPLO pair none
Parent of pair(s) 96071

Gene hit At1g14590

 
Sequence (A. th genome BLAST matches underlined) 
>57-K022798-022-633-A08-8409
AGCCATTTACAATTGAATATATCCTGAAATAAATCGCAGTAACACTTAGCTATGGGATCC
TCCCTATAGTGAGAGCAAAGGGACCCGCCTTAGAAGGATGATTTCCATTGACAACTGATC
CATGTGCTCCTTCCCCCCAAGACGGTGAGCGACGGGGCAACCGAGTGATCCACATGGGAC
TTTTAAACATCATCCGTCGGATGTCGCATGGGGCTATGGAATCCTCCCTA
GenBank Accession FR813679 [GenBank]
Graphic View Graphic view of gene At1g14590
Predicted Position of Insertion Chr1:5000195 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) T5E21
Hit Gene Code At1g14590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide-diphospho-sugar transferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR813679 [GenBank]

Gene hit T9A21

 
Sequence (A. th genome BLAST matches underlined) 
>57-K023225-022-633-A08-8409
GACATGAAGCCATTTTACAATTGAATATATCCAGTATCCAAATGCCTACCCTTAGTGGGA
GGCTATGAGCATCCACCCTACTAATTAGATAGTTAAAGCAGACAAACAAATTCTGTCTCA
CACTATAAATTATAATGGAAACTGATTGAAGNANNACTATGGNATCCTCCCTAT
GenBank Accession BX892836 [GenBank]
Graphic View Graphic view of sequence BX892836 of line 633A08
Predicted Position of Insertion Chr4:10114306 - go to primer design
BLAST e Value 3e-31
Hit Clone Code (BAC ID) T9A21
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37