SimpleSearch - Line and FST details


Line specific information

 
Line ID 633G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N460750)
Segregation Analysis 50:27:14
Confirmed for Hit At5g59040
Parent of DUPLO pair none
Parent of pair(s) 1301, 97248, 97249

Gene hit At5g59040

 
Sequence (A. th genome BLAST matches underlined) 
>47-K023277-022-633-G06-8409
GGTTCAATCACATTTGTTGATTTTTGTCTTAGATCGTTTTTATTTTCCTTGATTCCCGTT
GAAATAATGCATCACGAAAATAACAAAATTCGCGTCTTTTGCATTTTATACTCATGGCAC
CATTCCTTTTATAATAAGCCCTGCGCACACTCCAACTTTCTGAACCTGAAAAAAATTGGG
AATTACCCTCTTCTTTTC
GenBank Accession BX892884 [GenBank]
Graphic View Graphic view of gene At5g59040
Predicted Position of Insertion Chr5:23837161 - go to primer design
BLAST e Value 8e-26
Hit Clone Code (BAC ID) K18B18
Hit Gene Code At5g59040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation copper transporter 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX892884 [GenBank]

Gene hit MZF16

 
Sequence (A. th genome BLAST matches underlined) 
>47-K022798-022-633-G06-8409
AGCCCTTTACTCTTCCCGATTAATAGTATAGATTCTATGTCTGCCCACCACATGTTAATT
TACTGTTTCCTTGAAATCATTGGATTACCCCTAAGGCCCTAACATTAGAGCTATGGGATC
CTCCCTATAGTGAGGCNCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCNCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCTCCCCCTCCCCCCCCCCCCCGCCCCCCCCCCCCCCTCCCCCCGCCCCCCCC
CCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGCC
CCCCCCCCCCCCCCCCGCCTCCCCCCCACCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCT
CCCCCCCCCCCCCCTCCCCTCCCCCCTCCCCCCCCCCCCCCCC
GenBank Accession BX658261 [GenBank]
Graphic View Graphic view of sequence BX658261 of line 633G06
Predicted Position of Insertion Chr3:10585954 - go to primer design
BLAST e Value 4e-34
Hit Clone Code (BAC ID) MZF16
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37