SimpleSearch - Line and FST details


Line specific information

 
Line ID 634A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N460774)
Segregation Analysis 50:29:26
Confirmed for Hit At4g15396
Parent of DUPLO pair none
Parent of pair(s) 41367, 83846, 83847, 83848, 83849, 83852, 83854, 83860, 83861, 83862, 83865

Gene hit At4g10201

 
Sequence (A. th genome BLAST matches underlined) 
>41-K022368-022-634-A06-8409
AGTATTTGTAATAAAAAATATATTAGAAGAGCATCTCTTTAAAATAGTGTATCGAGACGG
TAAAATGTTATTTCACTTCTGAGACCGAACACCTCTCAGGACGTATAAACTTAAAAAGCT
GCGACAGACGGGCGGAAGGTGTAATATAACCGCAGAGAGAGGCGAACATGAAATACTGCA
CCGAGGTCTCGTGGATGGAGATCATGAACCCAAGAGGATGATAGTCAATAAATTAGTAAA
GenBank Accession FR813701 [GenBank]
Graphic View Graphic view of gene At4g10201
Predicted Position of Insertion Chr4:6356741 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F28M11
Hit Gene Code At4g10201 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g15396

 
Sequence (A. th genome BLAST matches underlined) 
>41-K022834-022-634-A06-8409
AGCCATTTACTATTGAATATATCCTTGACTTCATTACAATTTAATTATACCAAAAATTAA
AAATCTAACCACATACTCTATTACATAAAGAGAAATAACAAAACTGTGGATGTTCTTACT
TCCTTATAATAAATGACCGGATGTTTTTGTAT
GenBank Accession BX658273 [GenBank]
Graphic View Graphic view of gene At4g15396
Predicted Position of Insertion Chr4:8807939 - go to primer design
BLAST e Value 2e-38
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15396 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 702, subfamily A, polypeptide 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37