SimpleSearch - Line and FST details


Line specific information

 
Line ID 634F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N460834)
Segregation Analysis 50:46:36
Confirmed for Hit At2g04050
Parent of DUPLO pair none
Parent of pair(s) 662, 5983, 6019, 6031, 8800, 8802, 10488, 11379, 91597, 91612, 91664, 91675, 91680, 91681, 91683

Gene hit At2g04050

 
Sequence (A. th genome BLAST matches underlined) 
>46-K022368-022-634-F06-8409
AGCCTTTACATTGAATAATCCTGATAACTACTCTCTCCTCTTAAGTTCAAGATCAAGTTG
CCTCTCAAATCTTGATAACACTATATTAATTCTTTGTGCAGTTTGGGATCCTCCCTATAG
TGAGTCGTATTACTCACGCATTTGGACGTGAATGGAGACACGGTGACTAGGGGACCCTCC
CGAGAGTGAGATTATCGGGACAGTGAGATCTTCACTATAATGGGACGAACGGGAGGGACG
CCTTCGTCAATGGGGGGAAAAACAGAGAGAAACCCAAAGCGGTAAGTAATATCAAAAATA
AGGATAAGTTATCACATACTTACAAGGTATAAGATCAGCACTGGAAAAATCTAAATCAAC
AGTCAATAAACACTACAAAAAATAAAATTATAATACCAAATAACACAGTATCTACTAAGA
CATTACAACTCTCGAACTAACTTAAGAGCAAACGATGAAGAGTCAAAATAACATAAAGCA
ACACTGAACAATGTATAAATTGTTACAAGACAACTGACGACTATACATCAGATCTAGAAA
CAAA
GenBank Accession BX658352 [GenBank]
Graphic View Graphic view of gene At2g04050
Predicted Position of Insertion Chr2:1339011 - go to primer design
BLAST e Value 4e-40
Hit Clone Code (BAC ID) F3L12
Hit Gene Code At2g04050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX658351 [GenBank]


Last Updated on 10.06.2021 13:37