SimpleSearch - Line and FST details


Line specific information

 
Line ID 634G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N460852)
Segregation Analysis 50:40:35
Confirmed for Hit At3g45410
Parent of DUPLO pair none
Parent of pair(s) 5905, 5953, 5971, 5991, 10466, 11014, 11018, 87702, 87724, 87845, 87879, 87896, 87898, 87901, 87903, 87905, 87907, 87908

Gene hit At1g65900

 
Sequence (A. th genome BLAST matches underlined) 
>95-K022366-022-634-G12-8409
AGCCATTTACAATTGAATGAAATATTTTATGAGGATGTCCAGTGAGGCAAATATTCCATC
TGAATTCCACAATTATTCTTAAATCAAACTAAAAACAAAAAGTACATTCCAACAGAATTC
TATGGGATCCTCCCTATAGTGAGGCGAAGGAATCCCCCCATTAGGGGTGTATGGGAACCC
CCCTACATCGAGGCCATGGGAGCCCCCCTTTAAAAAGGCAGCAAACATCTCCTTTTTAGA
GTGGAGGAT
GenBank Accession BX658379 [GenBank]
Graphic View Graphic view of gene At1g65900
Predicted Position of Insertion Chr1:24518613 - go to primer design
BLAST e Value 1e-45
Hit Clone Code (BAC ID) F12P19
Hit Gene Code At1g65900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant/protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit BX658380 [GenBank]

Gene hit At3g45410

 
Sequence (A. th genome BLAST matches underlined) 
>95-K023207-022-634-G12-8409
ACTTCCACAAGTAATATTACAGCAAACTTGAAGCGCACAGGACATTCCAACAGAATTCGA
TGGCATCCTCCCTATAGGGAGCAGTGTAACACTTAGAAACGAGCCGGCGTAATCTACCCA
GACCTGTATAGGCTCCCCGGGAGGAAGATTTATGCTTATATTCTTCCCCAAAGCGTTGGA
AAAGTAAGATGGCAGAGCAGATTCAACAGATATTGGGCTGTTCAAATCAATACCAACATG
AGGCTTCTCCAGCTCATTAGACTCTACTGACTTAACGGTATCGAGCTCAATAGCTACGGG
ATCCTCCCT
GenBank Accession BX892918 [GenBank]
Graphic View Graphic view of gene At3g45410
Predicted Position of Insertion Chr3:16655278 - go to primer design
BLAST e Value 5e-98
Hit Clone Code (BAC ID) F18N11
Hit Gene Code At3g45410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Concanavalin A-like lectin protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX892918 [GenBank]


Last Updated on 10.06.2021 13:37