SimpleSearch - Line and FST details


Line specific information

 
Line ID 637E03
Vector Used pAC161
Line Availability available as T3 set from NASC (N461107)
Segregation Analysis 50:27:20
Confirmed for Hit At1g54090
Parent of DUPLO pair none
Parent of pair(s) 2902, 9628

Gene hit At1g33480

 
Sequence (A. th genome BLAST matches underlined) 
>21-K022272-022-637-E03-8409
ACATTATTTCAATTATTGTTTTTTTTAAACTCCAATCCTGAATCTTGACGATCTCTGGTT
TCTTCATTCAAAGGAGGAGACTTTTTGGGGTTTTTAGACTTTGCTTGCCTATGGGATCCT
CCCTATAGTGAGACTAGGGGATCCTCCCTATAATGAGAATATGGAATCCTCACCATAGTG
AGACTATCGGGAACCGGGATAGGGAATATCAACTCTCCCTATATAGAGAGTACCCTATAC
TCCCCATGAAGAGAGGATCGGAGCCACCCTAAGGGGAGGGAATCCACTCCAAAACCAAGA
GAGACCAATCCAACCACACACAAGGGAAGATAACATTCGCCAACAAAGAGAACAATCCAC
ATACACACAAACCAAAAAAACCCAACTACACCAAAAAAAACCCACGACCGGCGGAAACGA
AAACGTACTATTA
GenBank Accession BX658556 [GenBank]
Graphic View Graphic view of gene At1g33480
Predicted Position of Insertion Chr1:12150225 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) F10C21
Hit Gene Code At1g33480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At1g54090

 
Sequence (A. th genome BLAST matches underlined) 
>21-K022260-022-637-E03-8409
TTACTGATCTTGTTATCAGTCCCTGCTTGAGTCTTGAAGACCCATGGATACATCGTTCAG
AGGAGGATACTTTTGGGGGATTTTACACTTCGCGATGACAATGGGAACAACCCGATTTTG
CGAAGCGGTGGTGATCGAGAAGAAGTAGATCGGTACTTGAAAGCTGTAGATGAAGTTCAA
AGACACATCTCTTCAATCTCAATCTCCGATGAAGTCAAAGCAACGATTCAAATCGCCATG
GCTATGGGATCCTCCCTATAGTGAGACTATGGGATCCTCCCTATACTGAGACTATGGGAT
CCTCCCTATAGAGAGGCTATGGGATCCT
GenBank Accession BX658555 [GenBank]
Graphic View Graphic view of gene At1g54090
Predicted Position of Insertion Chr1:20189746 - go to primer design
BLAST e Value 2e-63
Hit Clone Code (BAC ID) F15I1
Hit Gene Code At1g54090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation exocyst subunit exo70 family protein D2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37