SimpleSearch - Line and FST details


Line specific information

 
Line ID 637G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N461133)
Segregation Analysis 40:7:6
Confirmed for Hit At2g44440
Parent of DUPLO pair 2375
Parent of pair(s) none

Gene hit At2g44440

 
Sequence (A. th genome BLAST matches underlined) 
>39-K022272-022-637-G05-8409
ATTGAATATATCCTGACATAGGAACAGGTCCTCGTTTAGCTGTCGATGAAGCAAACGGGT
GAGTGGGATCAGCTTGAGGATGAAAAGAAGGTGAAGAACTATGGGATCCTCCCTATAGTG
AGTCGTATTACTCCCCCCTTTGGACGTGCTTGTAAACTCTCTGTGTTATCCTCCCTATAG
TGAGCCTATGAGAGCCTCCCTATCGTGACCCTATGAAATCCCCCCTTTTTTGATCCATGG
TAACCCCCTTTCTAAGGGGTCGTTTTAATCCTCTTTTTAAGGGGTGATTCCCTCCCCTTA
TA
GenBank Accession BX658584 [GenBank]
Graphic View Graphic view of gene At2g44440
Predicted Position of Insertion Chr2:18337922 - go to primer design
BLAST e Value 3e-40
Hit Clone Code (BAC ID) F4I1
Hit Gene Code At2g44440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Emsy N Terminus (ENT) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g42420

 
Sequence (A. th genome BLAST matches underlined) 
>39-K022260-022-637-G05-8409
CAGAATATTGCAATGTTTTTTAGTCATAAATCATCCTCTTACGAGTTACTTTCTGTTTCT
ATGGGATCCTCCCTATAGTGAGAGCTTATAGGCCCCCCCACTATCAGTGATTCGGAGTGC
TTGACCCAAGAACAATCATCATGTGTCAACACCAGTATACTTAATATGCCCAGAAAAAGT
CTGCACATAGACTTTGCTATGGGATCCTCCCTATAGTGAGAGCTATGGGATCCTCCCTAT
AGTGAGGCTATGGGATCCTCCCTATGGTGGGCTACACTGAATTGCTAACTCATTACAGCT
ATGGGATCCTCCCT
GenBank Accession BX658583 [GenBank]
Graphic View Graphic view of gene At3g42420
Predicted Position of Insertion Chr3:14528602 - go to primer design
BLAST e Value 6e-45
Hit Clone Code (BAC ID) T14K23
Hit Gene Code At3g42420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37