SimpleSearch - Line and FST details
Line specific information
| Line ID | 639C04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N461276) |
| Segregation Analysis | 50:27:25 |
| Confirmed for Hit | At1g73870 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g73870
| Sequence (A. th genome BLAST matches underlined) | >27-K022256-022-639-C04-8409 ATTTACATTGAATGTGAAGAGCAGTGTACTTCCTGGCTGTGGGATCCTCCTTATTGTGAG TATTTCGTCTCTTTAATCAGTATGTATCAGCTCAAAGTCAACGGAACTCGACACTACTAA AGACTAACATAGAGATGAGAGATATAGCTATGGGATCCTCCCTATAGTGAGTCTTATTAG TCACGCGATTCTCCGTATATTGAGACACTCTGGATTTCCTGCTTTTTGTGGTCCCATGGA TACCGGCCTGTAGGGACTCCGTGGAGCTCTGCGTAGTAGAAATCACCAATCCGTAGGAAT GCACCATCCGGTGCACAGCGTCTTAATATGCTGAGGCAAGGGGGAGTAGAAGGCAGTGAA GCGAAAGGGACGCGAAGTTGACGCGGAACGACGGAGTACAAAAAGAACGTAGAGATTGGA GTGGAGCCGAATAGCACGTTCGAAAATGATCATTGGGAAACAATAATACAAACTGAAAGG ATAGGCAAGTGGGATTGGGAATGGAAGACCTG |
| GenBank Accession | BX658743 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:27780263 - go to primer design |
| BLAST e Value | 2e-32 |
| Hit Clone Code (BAC ID) | F2P9 |
| Hit Gene Code | At1g73870 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | B-box type zinc finger protein with CCT domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g33055
| Sequence (A. th genome BLAST matches underlined) | >27-K022274-022-639-C04-8409 TCTGTATTTCGCGAATGAAGCCATTTACAATTGAAAAGTCTGTACTTCTACTCCATTAAT CTTGATAGGCATATCTTCTAGTAGGCCATAGGGTTTTCTTAAGGTCCTATCAGCAAGGAT CAAAGATAGGTCGCACGACTTATATTTGACAAATCCCAGCTTCTTTGCCATAGAAAGTGG CATTAGGCTGACTGAAGCTCCTATGGGATCCTCCCTATAGTGAGACGTATTACTCN |
| GenBank Accession | BX658744 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:13583326 - go to primer design |
| BLAST e Value | 4e-91 |
| Hit Clone Code (BAC ID) | T15D2 |
| Hit Gene Code | At3g33055 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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