SimpleSearch - Line and FST details


Line specific information

 
Line ID 640B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N461360)
Segregation Analysis 50:20:15
Confirmed for Hit At3g63440
Parent of DUPLO pair none
Parent of pair(s) 93486, 93491, 93492, 93493

Gene hit At3g63440

 
Sequence (A. th genome BLAST matches underlined) 
>26-K022255-022-640-B04-8409
TTCTTTCACTTCCTGGATTGGACTAATATATATATATTTTCAGTTCCAATGAATGTCATC
TACCAAAGAAGATTCTACCGATTGCTTCTACTCTGTTTTCTCACCTGGTTGATTACGTCT
TTGTTATCTTGCTTCGAATACTTGGCTATGGGATCCTCCCTATAGTGAGGCGAATTTATC
CTCCCACTAATGGATACTAGCGGCCGCCCAGTCATCGTCTACCCAGTGAACAAATCAAAG
AACTAAAGATAGAGAGAATCACTTAGGCATCCTCCCTATAGTAGAGAATGGGGGCCGCAG
ATGCGAAAGACAGAAGA
GenBank Accession BX658826 [GenBank]
Graphic View Graphic view of gene At3g63440
Predicted Position of Insertion Chr3:23425627 - go to primer design
BLAST e Value 7e-54
Hit Clone Code (BAC ID) MAA21
Hit Gene Code At3g63440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytokinin oxidase/dehydrogenase 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g07920

 
Sequence (A. th genome BLAST matches underlined) 
>26-K022275-022-640-B04-8409
CTGGCGTTATTTATGCGGGCCCAGGAAATAAACAAAGAATTCGGCTGCCATGACCTGCTT
CAGCTTTGCCAGGTCAAGACCAACGCCAGGAGCGACCAGGGGACGTACTACATCAGCGCT
CGTCCCGGATCTCTGATCCTATGGGATCCTCCCTATAGTGAGACTAATTNATCNTCCATT
TATACTTAATTTTTAACCCTTTATTTATTTATCC
GenBank Accession BX658827 [GenBank]
Graphic View Graphic view of gene At4g07920
Predicted Position of Insertion Chr4:4724218 - go to primer design
BLAST e Value 2e-74
Hit Clone Code (BAC ID) T24G23
Hit Gene Code At4g07920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37