SimpleSearch - Line and FST details


Line specific information

 
Line ID 643C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N461666)
Segregation Analysis 60:37:27
Confirmed for Hit At1g61810
Parent of DUPLO pair none
Parent of pair(s) 7724, 11382
Note

Gene hit At2g05420

 
Sequence (A. th genome BLAST matches underlined) 
>75-K022303-022-643-C10-8409
TCCGGACTGAGCCATTTACATTGAATATATCCTAAAATTGATTTACTAAAGTTAGAGAAA
ACTTTTAAGATAAATGTTTACAACATAACATAAACCATAAAATAGAGCAAGCATAGAGAA
CAATAACCTGTTAGTTTGGAGAGTTTTTCTGATTTTTGATTTACTAAAGTAAGAGAAAAT
TTAGTGTGTCTTGTCCATCCAATAGGGAAAGATTTACTATTAGCAACGTTTAAATACAGA
GCCAAATTATTAGCCCTATAAGCCAAATAAGTCGCCTTTTCATTTCCCTTGGGATAGGCC
TTAAGACGCCTGCAAGCAAAAACCAAAGTAAAATAATCAGCTAAACCCATATTCTATGGG
ATCCTCCCTATAGTGAGACCG
GenBank Accession BX659159 [GenBank]
Graphic View Graphic view of gene At2g05420
Predicted Position of Insertion Chr2:1984366 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F16J10
Hit Gene Code At2g05420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAF-like family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 650H12

Gene hit At1g61810

 
Sequence (A. th genome BLAST matches underlined) 
>75-K022257-022-643-C10-8409
CCATTTACAATTGAATAACTATTCCTCGATTGAGTTTCAGTATTTTAATTTATCAACTCT
GGTTAGTATATGAGATGCAATCGAATATTTTCTTTTTTTTACCATGCAATGCAATGTAGT
ATTAATAATACTGCTGATTTAACTAAAGAAGGACTTACTATGGGATCCTCCCTATAGTGA
GACGAATTAATCCCCCATATAGACATGCTTGGAAAATCCATATATAAGCCCCAATAAATA
CAACCAGTATCAGAAATACACAACTAATTCTTAATAAACTAAAATACCATCACCTCCTAC
TTATTCGAAAACCCCCATACAACCATACAAACATACACTTCAACACTTCACTATCCCCTA
TAATTCTCTCACATTTTTAAATTAATCTACATCTACTTTATCACTAAAACATATACCTCA
ACCATACATCATAACCTCTACACATTACCAACCCCGTATACAACTCAACTACACAACCAC
TAAATAAACAACTAATCAATATCTCTCATCCCTAACCACATCACATCAATCACTAAAAAT
ACATATCAACACACCAAT
GenBank Accession BX659158 [GenBank]
Graphic View Graphic view of gene At1g61810
Predicted Position of Insertion Chr1:22830882 - go to primer design
BLAST e Value 5e-61
Hit Clone Code (BAC ID) F8K4
Hit Gene Code At1g61810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-glucosidase 45
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37