SimpleSearch - Line and FST details


Line specific information

 
Line ID 645G04
Vector Used pGABI1
Line Availability available as T3 set from NASC (N461900)
Segregation Analysis 50:29:20
Confirmed for Hit At1g05780
Parent of DUPLO pair 12096
Parent of pair(s) none

Gene hit At1g05780

 
Sequence (A. th genome BLAST matches underlined) 
>31-K021429-022-645-G04-8409
CTTTACATTGAATATACCCTAAATCTTTCTTGACAAATCATAACAACTTTGGTTAAAAGG
TTTCGAAAACTCAACCTCTTCTTCAGTCTCTCTCTTTCCAAAAGGGAAAGACTGAAGTAG
AGATTGGGTTTCCGATACCTTTTGGCCCATGTCGTTATGATTTGTCGAGGAAGGTTTGAG
AAATTGAAAGAAGATGCGCTAGGACAACTTGAAGGAAGGGTCAAAGATGAAGAAGATGAA
AAGCCAGAAAGATCCTTATCATTATAGCTAGAGAGATCTTCACAAACTCATAAAAATCAT
ATATATTCTTACTAGGGTTTCCACTCCTAATGAGTGAAGTCAATGATGCCTTGAAGCAAA
ACAACTTCATCTTCTTCGCTGGAGATCATAAACTACACAAATTCTTGAAATCTTTGGCTT
CTACGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX659382 [GenBank]
Graphic View Graphic view of gene At1g05780
Predicted Position of Insertion Chr1:1727257 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T20M3
Hit Gene Code At1g05780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX659381 [GenBank]


Last Updated on 10.06.2021 13:37