SimpleSearch - Line and FST details
Line specific information
| Line ID | 648C02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N462138) |
| Segregation Analysis | 50:37:35 |
| Confirmed for Hit | At4g05140 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 450, 77097, 77098, 77099, 77100 |
Gene hit At4g05140
| Sequence (A. th genome BLAST matches underlined) | >11-K023297-022-648-C02-8409 AATTGAAGTAGAAAGGCCATCCTTGATCACCATATTTTGCAGTGAAGTAGAAAGCCGGAA CCACGAGAAACCGGGTTTAAAACCGCGACGGTTAGTCCTTTTCTGCACTATATATTTACA CATTTCAACATCGGGATCGATCTACCATACTAATTCCCACCAATTGCACATTGCTATTAT GACAAGCGCATACCACGAGCCTATGGGATCCTCCCTATAATAAAGCCACCATCTACTCTC CTCTACGTAAATACTGAGAGCCCGGGCTATCCTTTCAACCGAGACCACCGAACCGGAGAA ATCTCCGCCAACTAGGTAAATACTGACAAAACCAGCCCCCCGATATCCTGCACCGACCCC CACCTCCACCCTCCACCCCACCGCTCCTACACTTCACACCTTAATCCCATCCGGGGCCAT TTGCAACTCAACCTCAGCCCACACCCCGCGCCCNGGCGCCCCCCCCNAAACAAAGATACC CATTTCATCTTCAAATTGGGCTGAGATTATGCGAAAATTTACACTCAT |
| GenBank Accession | BX893617 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:2651512 - go to primer design |
| BLAST e Value | 4e-49 |
| Hit Clone Code (BAC ID) | C17L7 |
| Hit Gene Code | At4g05140 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Nucleoside transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX893617 [GenBank] |
Gene hit K24A2
| Sequence (A. th genome BLAST matches underlined) | >11-K023275-022-648-C02-8409 CATGAAGCATTTACATTGAATATATCCTGGATTTTACGCATGTGTCCTGGACTCAGCTTT TTGGCCAATGGAAGCCATGTGAGAATTTCTTACCCCACAAGTTACTGATTATTTGATATA CGGCTTTTATAGGGAAACTAATATGATGAGACGCGGGGAGAGACATTTTGCTTGAAGCCG CATAGACCGCCCCCAACGGGGTGGCCCGGGGGGGGGGACATCGCCGGCAACCCCCCATAA CCGCCGACACCCGCCCCCTCTCCAGATTGGCCCCGACATTATCCGAAAACCCTCCCCCCC ATCCCCTCCTACCGCCCGCGCCAGCTCCCCGCCCCCGGCACACCACTTCACCTTCCGACC GCGCCCCCCCCCCGCCCCAATCACCCCGAGAAACCCATGGCATCTCCCCAATGGGCCGAC ATTAGGGGCCCCCTCCCGCCCCCTCA |
| GenBank Accession | BX893616 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:10380057 - go to primer design |
| BLAST e Value | 2e-07 |
| Hit Clone Code (BAC ID) | K24A2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX893616 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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