SimpleSearch - Line and FST details
Line specific information
| Line ID | 649C09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N462241) |
| Segregation Analysis | 50:49:49 |
| Confirmed for Hit | At4g10510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6312, 6345, 6370, 10599, 10615, 41749, 84044, 84045, 84046, 84047, 84048, 84049, 84050, 84051, 84052, 84053 |
Gene hit F7A19
| Sequence (A. th genome BLAST matches underlined) | >67-K023273-022-649-C09-8409 AACGATTCTACTCATTCCGATTATTGTTTCTATAATACTAAACTAAATAATACTTTAGCA CATTATTAAAAAACTATTGTACCGTGACTGACCAAATTCTGTTAAACTTATGCATTAGCC ATTAGGGCTGAAGTTTTATGAAACGTATGATGCATTAGGAATTTTACCAATATACGAAGG TTTATCTTATTTGAATTTTAGATTTTAGAATCCCCATGAATTTGGA |
| GenBank Accession | BX893682 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4858276 - go to primer design |
| BLAST e Value | 4e-120 |
| Hit Clone Code (BAC ID) | F7A19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At4g10510
| Sequence (A. th genome BLAST matches underlined) | >67-K023088-022-649-C09-8409 GAGCTTTTTGTTGCAGTGAGAGGAGTTAAATCCTCTCCTGATTCACAGCCTCCTTTCCAA TGGCTTGGTACCGGACCAATCTCGTTGTCGTTAAATACTTCAGATTCTGGCCATACTCCT ATATTGACAAAACAAAGTTTAGTCATTGAGACGCTAAGACATATATAATAACAGAAACTT AAGAAATGTAAAAATATATATACCTGAGTCTATAATGCCAATGATCATCTGTTCACCCAT ATTAGTTTGATTTAAAAGATTCTTTGGATTGGTGGGAGAAAGGCCTAAGTAGTCCCAAGT CCTATGGGATCCTCCCTATAGTGAGTCAAAGCTACCATACCAACGAAACTGATAACCTGT AAAGATATAAATTACAACTTAGAAAACTGGATTTGAGATGGACAGCTTCCCCTATGGGAT CCTCCCTATAGTGAGACC |
| GenBank Accession | BX659957 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:6496846 - go to primer design |
| BLAST e Value | 2e-162 |
| Hit Clone Code (BAC ID) | F7L13 |
| Hit Gene Code | At4g10510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Subtilase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MZB10
| Sequence (A. th genome BLAST matches underlined) | >67-K022837-022-649-C09-8409 CTTAAATCTTTGACTTTATTATTGTTAATTATTGATATTATTTTGGAATTGATCTGTGAT TCTTACGCATTATATCCTCAGGTAGAGGATTAATGAGTATCATGATGATATAAGAATTGT TCCTCTACCACAATAGTAATACTAAAAAGATTGTTTGATAAACTTTACCCCATGATGGAG GAACTAATCAACAAGATTATAGAAAACTCTCTATGGGATCCTCCCTATAGTGAGTCGTAT TACTCANTGANNANCCTGNNAGGGATACATAATTAAGATCTACCATAACAACGAAACTGA AAAC |
| GenBank Accession | BX659956 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:2803235 - go to primer design |
| BLAST e Value | 3e-22 |
| Hit Clone Code (BAC ID) | MZB10 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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