SimpleSearch - Line and FST details
Line specific information
Line ID | 650B06 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N462322) |
Segregation Analysis | 50:41:39 |
Confirmed for Hit | At2g26150 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F28N24
Sequence (A. th genome BLAST matches underlined) | >42-K021277-022-650-B06-8409 ATATAACCCAATGGAACAGATATCTTTATATGGTGATGCAAGGCGTTTAGCCTTAAGATT TCGCGCTTCATGCAAAGTTTTGTGTTTGTAGTGTGCAACAGTATCCACGCTATATTGTAA TACCAACACCTTTATGCATGTTGTAATTAAAATATCTACATATATAAAAGAGAATGGAAA ATGCTAAAATGATTCGATAAATGATTTTTTTTTTCTTCTTAAAGGGATGTGACCCCTTAA GGGAACCATAACCCCAACCATAATATGCAAAAATTAATGTAATTTTAACCCCTATGGGAC CCCCCCTATAGT |
GenBank Accession | BX660059 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:10232299 - go to primer design |
BLAST e Value | 3e-37 |
Hit Clone Code (BAC ID) | F28N24 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At2g26150
Sequence (A. th genome BLAST matches underlined) | >42-K021296-022-650-B06-8409 ATTCGGAATNAGCCATTTACATTGAATATATCCTGAACACGAAAATGGAAGAACTGAAAG TGGAAATGGAGGAAGAAACGGTGACGTTTACTGGTTCTGTAGCGGCTTCTTCATCTGTAG GATCCTCTTCCTCTCCTATGGGATCCTCCCTATATTGAGATTGTTTATGCAATTATGGAG GGGACTTGGTCTATGGGATCCTCCCTATAGTGAGATTTCCACAATGATACCACTAGGGGT TTTTTTCAATTCAAAAATGTAGATGTCCCCACCCTTATTAAAAAACGACCTTTGGTTTCC CTATGGGATACTGCTTAAGGTGCGTTCCTTCCTTTTCGACTATCTTCTATAAAAGGGGAC AGATAGCTGAGCTATGTAATCCAAGGACGTTT |
GenBank Accession | BX660060 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:11135850 - go to primer design |
BLAST e Value | 1e-49 |
Hit Clone Code (BAC ID) | T19L18 |
Hit Gene Code | At2g26150 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | heat shock transcription factor A2 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |