SimpleSearch - Line and FST details


Line specific information

 
Line ID 650B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N462325)
Segregation Analysis 50:32:28
Confirmed for Hit At3g25170
Parent of DUPLO pair none
Parent of pair(s) 94571, 94576, 94580, 94583, 94585, 94586

Gene hit K7P8

 
Sequence (A. th genome BLAST matches underlined) 
>66-K021277-022-650-B09-8409
CTGTCCCAAGAAACCTGATTTTTCTGTGGACAGGTCCTCTACATAAATGGTAACTAATAT
TACATGTTTTTCTTTAATTTTTTCGTAACTTGGCCACATACTATTTTGTTTCTTGATGTC
AACGGAGACAGCCAACAATCCTGTCAAATTTGTTTCTGTTTGAGTTTGTCTTTCTCAATA
TTGTTTCTTTCTTAATACCTCTCTCTCTCTTATTTTCTTTCTGTTATAACCTATTACCCT
CCACATAAAACCTCAAACTTATTCTGTTTCTGGTTTTTACAAGACTGTTGGCTATTTTCT
ATGTTCTTCATATACCACTCATCAAATTTTTTGACCATCATTTTCCTATATTATTTGCTA
TGCATATCCTCCCTCTAATGAGTTCCCTCTTCCCTTTTCTCAAATCTTGA
GenBank Accession BX660061 [GenBank]
Graphic View Graphic view of sequence BX660061 of line 650B09
Predicted Position of Insertion Chr3:9052445 - go to primer design
BLAST e Value 1e-95
Hit Clone Code (BAC ID) K7P8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g25170

 
Sequence (A. th genome BLAST matches underlined) 
>66-K021296-022-650-B09-8409
CTATGCGCTCAATGGCGAGCCTGGGCTACATGAACGAGATCCAATGATTTCCGGACCCTG
TACGCTATCCCCATATTGCTGATGCGGACTGCTGGCATGGTGGTTATGCTCTCAGCGCAG
CGGGATGTGCATCTCAAAGAATCATATATAAACATGATACCTTTTATATGATTGCTACGT
GTGGCGAAATTATCCAGCATACTGATTTCACTTGAGACACAAGATCCTGTAACTGAAATA
ATTTTATCGATGTTTTGTGCTTATAATAATGCTAAGACTCTTATTATAGTTGAGTAATTT
CATCAAGACACTTCTCCTAAAATCCTATATGCCTCATCTCATAAATACACTATATGTCTT
ATCTGACCCTGTCGTAAGTACGTAGAATCCAAGACCTATAAGATTTAATGTTCCAAACAA
ATAAACATCTAAAGATACAACCCATTTAAGAACCAACAAACCCAAAGTAATGTAAATTAC
CCCATGTTGTTTAGGTTCCTA
GenBank Accession BX660062 [GenBank]
Graphic View Graphic view of gene At3g25170
Predicted Position of Insertion Chr3:9166028 - go to primer design
BLAST e Value 5e-110
Hit Clone Code (BAC ID) MJL12
Hit Gene Code At3g25170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ralf-like 26
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37