SimpleSearch - Line and FST details


Line specific information

 
Line ID 651F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N462465)
Segregation Analysis 50:35:19
Confirmed for Hit At1g77660
Parent of DUPLO pair 2577
Parent of pair(s) none

Gene hit T1O3

 
Sequence (A. th genome BLAST matches underlined) 
>38-K021212-022-651-F05-8409
CTATGCAAATACAAAGAATAAAAATGAAATTCCTACGAAAAAGAAGGTGCCACTTGTCGG
CCATATGCCAACCTAGTATCTATGGGATCCTCCCTAAAGTGAGTGCCTATGTCGATGTGG
ATGCCAATCTGATACGTGCGTGATTCATGCCCTTTCCCACTTTGATCTACCTCTGACAAA
TGTATGAATCCACGGGGGAGCCAACCATTTACTAGCCGGCCAAATTAAAGTCGACAGCAT
TACTCCGATTATTCTAATTCACCAATCTTTATTGTGTCCTGTCCACTTAAAGTTCTACCT
AGTAAATAACAAGAGGGGNTTTNNTTTTAATATCATTTATAACTTTCAATACAGAACAGA
TTAAATAATAC
GenBank Accession BX660233 [GenBank]
Graphic View Graphic view of sequence BX660233 of line 651F05
Predicted Position of Insertion Chr2:1555971 - go to primer design
BLAST e Value 1e-24
Hit Clone Code (BAC ID) T1O3
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g77660

 
Sequence (A. th genome BLAST matches underlined) 
>38-K021264-022-651-F05-8409
ACCATTTACAATTGAACAGGTCTCAGAGTCTAAAGGAATATGGTTAACGAGATTACCATC
ATCCCATTCACCGGATTTGATATCAACGAGTTCTAATCTTCACGTGCCATAACCGTGTTT
ACTACCTTCATGACAAGCTCCTTCGTAATAGTGACCATTAGCGAAATGGTAAACACCAAA
TCCATGAATCTTGTCTCCAAAATACTCTCCTGCATACTTATCTCCATTCCTACAACAACA
AAAATTTCATAATAACAGAACTCAGAAATAAAACAGAGAAATAACAGCTTTTGTTTGTTA
TTACCTGAAATGGTAAGAACCAAGTCCATGTTTGACACCAAATTTGAATTCTCCGACAAA
AGAGCTTCCATCAGCACAAGTTTGAACTCCAAAGCCATGGCTTTGACCGTTAAACCATTC
ACCAGAGTAAGAATCTCCGGTGTAAAACCAGTAAACTCCAAAACCATGTCTAAGTCCTTG
CTTATACTGTCCTTTATATTTACTTCCTTTAGACCAACACTCGATTCCATAACCATC
GenBank Accession BX660234 [GenBank]
Graphic View Graphic view of gene At1g77660
Predicted Position of Insertion Chr1:29186341 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Histone H3 K4-specific methyltransferase SET7/9 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37