SimpleSearch - Line and FST details


Line specific information

 
Line ID 654A08
Vector Used pGABI1
Line Availability available as T3 set from NASC (N462696)
Segregation Analysis 50:48:35
Confirmed for Hit At1g07550
Parent of DUPLO pair none
Parent of pair(s) 1295, 10725, 72893, 72958, 72993, 73021, 73051, 73137, 73165, 73191, 73217, 73239, 73260, 73309, 73331, 73351, 73411, 73430, 73462, 73475, 73501, 73511, 73522, 73531, 73541, 73552, 73553, 73554, 73555, 73556, 73557, 73558

Gene hit At1g07550

 
Sequence (A. th genome BLAST matches underlined) 
>13-K117831w-0022-654-A08C-CR3S
TAAATTTCTAATTTCTTTACCATAACAACTTGAAAGTTATTTGTCATTTTGTTAACGTCA
GAGTAAGTAAATCTTCTATTTTCCGATTTGAAGGATGAGCGTGTAACTGCATAGAAAAAT
TTAACAGAATTCCATGAGAGCTATACAATATGGGATTATATTCTTCTATATGTTATTCTC
CTTTAAGTACCTTTCCCAGCAGATGGCTTTCTCCTTCTTAAAACAAATATGAGAACTAAC
ACAAGTATGATAATGGCCACTGCAGAAACAGATGCCGCAACCGCAGCTGTTGGGAATCTT
GTACCGCAAGACACACAAATCATATTTTCGTCAACCCTAAAGAATAAAGAACGTAGTGAA
TTTCAGAAACGAGAGTGGGCACGTAGTAAATCAATAAAGATCATCTCAAAAAGAAATCTT
ACAATAGCTTTAATCCTTCCTTTTTTCTATCAAGAAGGGCTTGAGGAACCAAACCGCTCA
GTTTGTTCCCACTTAA
GenBank Accession HG969076 [GenBank]
Graphic View Graphic view of gene At1g07550
Predicted Position of Insertion Chr1:2324008 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F22G5
Hit Gene Code At1g07550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX660399 [GenBank] HG969076 [GenBank]


Last Updated on 10.06.2021 13:37