SimpleSearch - Line and FST details


Line specific information

 
Line ID 655E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N462837)
Segregation Analysis 50:49:44
Confirmed for Hit At1g68130
Parent of DUPLO pair 11678
Parent of pair(s) none

Gene hit K15C23

 
Sequence (A. th genome BLAST matches underlined) 
>37-K023210-022-655-E05-8409
AGCCATTTACAATTGAATATATCCTGCCGGGAAGCTATGGGATCCTCCCTATAGTGAGAC
CTATGAATCCCCCCCTTAAAGGAGATTGGTAACCCCCCGGATAATCCATATTTGGAATCC
CCCCGGGATCCCCCCCATTGGGATCGACCGTTTTCCCCCCCAACAAAGTGACCTCTGGGA
TAACATTATATCCATAGGGGGGGGGGGGGTCTTATCTCTTTAAATTTTNCAATAAAATAT
TTTACGTGATCCATGTAAAAGCATTATACGGCTGATCAACCTCTAAACCAAA
GenBank Accession FR814182 [GenBank]
Graphic View Graphic view of sequence FR814182 of line 655E05
Predicted Position of Insertion Chr5:17972377 - go to primer design
BLAST e Value 8e-26
Hit Clone Code (BAC ID) K15C23
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g68130

 
Sequence (A. th genome BLAST matches underlined) 
>37-K025927-022-655-E05-8409
ATGAACCATTTACAATTGAATATATCCTGAGTAGTTAGCTGATCCATCATACTCCTTTTG
AAGCAGTTGGAGTATGTTGATGCCGCTCCTCCATGAAGCGATGTTGACCGCTCTACCTTA
GTAAGGGAACCATCCCACCCCGAGTACCAACAATCATCGACATTGAACTGACCCCCCATG
ATGAGCGAAAAAACCGATATCTCCGGGGGTGGGCCGAGCAATTGCGCAAATAACATAACC
CCTAAGCTATCTATCAGGATTATGACATCAATGCAAAAGTCTCTAACTTGAAAACAATAC
CTAATATACTTTTCAAGCAATGCTAGATATAAAGATCCCCACAATAGAGACATTAATGCA
AATCGAAATCCCCTAATTGAAGTTTCCCGAATCCCATAAAACAAAGCAACATGCAAAAGC
TGGGGGGGGCAATCTCATCTTTTTACATAACAATCAAGTATGACGATTANTGCAACGATG
ATGCAAATAACTTGCCACAATTGCCACCAACATTTTCAAGCTCCGGCTGCT
GenBank Accession CR398152 [GenBank]
Graphic View Graphic view of gene At1g68130
Predicted Position of Insertion Chr1:25533708 - go to primer design
BLAST e Value 1e-27
Hit Clone Code (BAC ID) T23K23
Hit Gene Code At1g68130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation indeterminate(ID)-domain 14
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR398152 [GenBank]


Last Updated on 10.06.2021 13:37