SimpleSearch - Line and FST details


Line specific information

 
Line ID 658A06
Vector Used pGABI1
Line Availability available as T3 set from NASC (N463078)
Segregation Analysis 60:60:54
Confirmed for Hit At4g10390 At4g02270
Parent of DUPLO pair 2558
Parent of pair(s) none

Gene hit At4g10390

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021150-022-658-A06-8409
GTATGTCAACATGCCTATATAGCGAACAACTTGATAAAACAAATAAAGATCAAAACTTTG
ATTAAGACAAACTTAATCACTAAAATTGGCTTAATCAAGACAACAACACAATTGACCAGA
CACCAAATATTTGCAGAATCTATGAGATTTCAGAAGTAGTATGGGATCCTCCCTATAGTG
AG
GenBank Accession BX660623 [GenBank]
Graphic View Graphic view of gene At4g10390
Predicted Position of Insertion Chr4:6442511 - go to primer design
BLAST e Value 8e-72
Hit Clone Code (BAC ID) F24G24
Hit Gene Code At4g10390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g02270

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021134-022-658-A06-8409
AACCATTTACATTGAATATATCCTGACAGAAGTATTTTATTGCATTACAGTTATTTTACA
AATACATTATACACTACTAAGGGTTGCCTATATGCTCTACGCATGATGGAATCCCTAATA
GAGCCCTCATTCTCTTATATGGGTATACGACTACAACATTATTCTACAAAGAGACAGATT
TGTAGAGAGGAACCGGCGATATCATGGGGCATGCCAGGTTGGTATCATCACTATAGTTGA
GAGTAAGTAGGTTCAGACGTGTAGAAGAAAGGACCAGCCCAGTAAAGCTTGAAGCTCTTG
TCTTGAAGAATACGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660622 [GenBank]
Graphic View Graphic view of gene At4g02270
Predicted Position of Insertion Chr4:992179 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) T2H3
Hit Gene Code At4g02270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation root hair specific 13
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37