SimpleSearch - Line and FST details


Line specific information

 
Line ID 658A12
Vector Used pGABI1
Line Availability available as T3 set from NASC (N463084)
Segregation Analysis 50:24:17
Confirmed for Hit At5g57150
Parent of DUPLO pair 12068
Parent of pair(s) none

Gene hit At5g57150

 
Sequence (A. th genome BLAST matches underlined) 
>89-K021150-022-658-A12-8409
ATTGAATATAGCCATGAGCCAAAGAAGAGACTGGTCCCATACTCCCCCCATTAAAGATAA
AGGAATCAAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660630 [GenBank]
Graphic View Graphic view of gene At5g57150
Predicted Position of Insertion Chr5:23154634 - go to primer design
BLAST e Value 7e-29
Hit Clone Code (BAC ID) MUL3
Hit Gene Code At5g57150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g13340

 
Sequence (A. th genome BLAST matches underlined) 
>89-K021134-022-658-A12-8409
GAAGCCATTTACAATTGAATATATGATCGATATTCGGAGAATACGCTTATAACATTGTAT
TATTATACAATCTACATTTCCCATTTTACCCTCGCTTCTCCTTCCAATTCTCACCCCATT
GCCACTTCACTCAGATGTCTTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660629 [GenBank]
Graphic View Graphic view of gene At4g13340
Predicted Position of Insertion Chr4:7758496 - go to primer design
BLAST e Value 2e-50
Hit Clone Code (BAC ID) T9E8
Hit Gene Code At4g13340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat (LRR) family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37