SimpleSearch - Line and FST details


Line specific information

 
Line ID 658B07
Vector Used pGABI1
Line Availability available as T3 set from NASC (N463091)
Segregation Analysis 50:38:33
Confirmed for Hit At1g15210 At1g33170
Parent of DUPLO pair none
Parent of pair(s) 4366, 4367, 4418, 4600, 10075, 73627, 73639, 73662, 73670, 73678, 73679, 73680, 73681, 73682

Gene hit At1g15210

 
Sequence (A. th genome BLAST matches underlined) 
>50-K021150-022-658-B07-8409
TTTACATTGAATATCGAAACACTAAACTGGCTTTTCACGAGAATTTCAATGAAAGGTCTA
TTGTTTCATTACGAATCTTGATATCGGTATCTTAAATGCTCAGTAACCGATGTATTTCCT
ACAAGCAACCACAATCTCCACTGATCTGGTCATATCCCCCACACTTGTACCAATCAGAGA
TAGAATTGCTCATTGACATAGGGGATTTCACCGCCCATGCTACAAATGGGATCCTCCCTT
TTGTAAGACCATACTGCCGCATTTCCTCGGGCATGCCCGTATGGAAGACTCCCTATTTTG
GGATCTATTAATAATAACAATAAGTTTAACTAGTTTTCAAAGTATTACCGCAGGCATGTC
AACAAAGTATTTAACATCGTCAAATGACATAGCTAGAGGAGTGAAAGGAAGAACCATTCC
TTTCTTGGCGCTCACACTCTCCATCTCAGTCTCCTCTGTTTTCCATAAAAGAGTAAATTC
TTAATATTATTGTTTTTTGGTTTATATAATGAATTCTTAAG
GenBank Accession BX660640 [GenBank]
Graphic View Graphic view of gene At1g15210
Predicted Position of Insertion Chr1:5233181 - go to primer design
BLAST e Value 4e-120
Hit Clone Code (BAC ID) F9L1
Hit Gene Code At1g15210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pleiotropic drug resistance 7
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g33170

 
Sequence (A. th genome BLAST matches underlined) 
>50-K021134-022-658-B07-8409
CAACAACAAGACATGGTTTTTCAGGTGTATTATAATGAAAGGAGCATGGCCCTCATACGT
GAATTTGCTCTAGGGATCCTCGATGCTCAATAACCGATCGAGTTTGCATCTCAACCTCCA
TTCGAATATCTGTCGAAAACCCAGACGGATATATCAACAGTGACACATTTGATCCTCCCC
AGTAGGCGATCTCGTCCATTATGTCCCTAAGGCATCCTCCTGATAGCGCGGGCATTATCT
GTTTGTAATATGATATTCTCTCCTTCCACACTTCATTGTCTTCTCTGAATTTCTCAGCAT
TAATGTCCGGAATGGTTCCCCCGATTATCCTAGGTGGCACCGCAAAAGCTCGGTTTGGCC
AATCCTCCAATGCACCGCCTGCGAATTCGTCTGAACTGTTTGCTTCTGGTAATGGTGTTA
CACAAGATTCCAAATCTTTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660639 [GenBank]
Graphic View Graphic view of gene At1g33170
Predicted Position of Insertion Chr1:12029654 - go to primer design
BLAST e Value 1e-119
Hit Clone Code (BAC ID) T9L6
Hit Gene Code At1g33170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37