SimpleSearch - Line and FST details


Line specific information

 
Line ID 659D12
Vector Used pGABI1
Line Availability available as T3 set from NASC (N463216)
Segregation Analysis 50:42:41
Confirmed for Hit At3g18160 At2g11270
Parent of DUPLO pair 12527
Parent of pair(s) none

Gene hit At3g18160

 
Sequence (A. th genome BLAST matches underlined) 
>92-K021135-022-659-D12-8409
TTTCTTGTTCGATTTTTACTTTTCTCTTTTTATTGTCTGATTAATCATTGTTCAACTCCT
TCTATTTTATTGTTCATTCTGAGTACCTTTTTGTGTATGTTATCCTCCCTATACTGAGTG
ATTATGCTTGGTCTCTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660807 [GenBank]
Graphic View Graphic view of gene At3g18160
Predicted Position of Insertion Chr3:6221763 - go to primer design
BLAST e Value 3e-06
Hit Clone Code (BAC ID) MRC8
Hit Gene Code At3g18160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation peroxin 3-1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g11270

 
Sequence (A. th genome BLAST matches underlined) 
>92-K021151-022-659-D12-8409
AGCCATTTACATTGCTCAGCCTTCAATTCACCGAGTAGGGGATCATCCCTATAGTGAGAT
AAGCTTAAGGGAAAGAGCGCATGCCGGAATACTTTTGCGTGAGGTATATGGACGAAACGC
AGAAGCAGAACCTTGACCCCTCTTTTTTGACAGAGAGAGGAGGATCAAGAACATTTCCTA
AAGACAACTACGCAAAGCATTAATCACTATAACTCTTTAATCGACTCTGTTGTTTCTACA
CCTCAAAAGATTTGTCCCTCGGTCACAATAACATTTCAAACAGAAAAAGTTGTATCCAAT
GGTCACTTATTTCTCAAACTTTCTTCTACCTCTTAACTGTTTATGACTCCTAACTCTTAT
GTTTAATTACTGCGAATTCAAGGAAACATCAAGTAATCACTGGCACACTTTATTGATCAC
TGAGTTTGGTTATTTAAAAACAGAACGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX660808 [GenBank]
Graphic View Graphic view of gene At2g11270
Predicted Position of Insertion Chr2:4484787 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T13H18
Hit Gene Code At2g11270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation citrate synthase-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37