SimpleSearch - Line and FST details


Line specific information

 
Line ID 661G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N463444)
Segregation Analysis 50:43:37
Confirmed for Hit At4g13095
Parent of DUPLO pair none
Parent of pair(s) 65357

Gene hit F16L1

 
Sequence (A. th genome BLAST matches underlined) 
>95-K023896-022-661-G12-8409
GNAGCCATTTACAATTGAATATATCCTGTAGCGTCACCTTAAAGGCTTATTAAACTCCAC
GTTGTCTTTTTGACCTCTTGACTTTGAATGATCTTACTATGGGATCCTCCCTATAGTGAC
GAAATGTGAACCCTTGTCTCGCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX894134 [GenBank]
Graphic View Graphic view of sequence BX894134 of line 661G12
Predicted Position of Insertion Chr1:7832739 - go to primer design
BLAST e Value 2e-20
Hit Clone Code (BAC ID) F16L1
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g13095

 
Sequence (A. th genome BLAST matches underlined) 
>95-K023861-022-661-G12-8409
GNAGCCATTTACATTGAATATATCCTGAGCTTACCGAACGCGGGTCATCTTGTCGTCTCT
TAACATAATCGCGATTTTTAATACGGCGTGAACTTGTTTATCCGGTCGTCCATTTGTATG
TGCATGCCCACCACTGGGTTCCCCTCGGGACTGCTTGCCCTTCCGTGCGATAATGACTTC
CGCTCCACCACCCAAACGTCAGAAAGCCTGGGGACGGCGCAATTTTCCAAAACTATCCCT
TGGCTCTTCTGGAACCACTATGGCATCCTCCCCATAGTTTTGAACCCCCCATTTAGATGC
CGGTTGATCATCCCATAACTAATCATCTACTCGTTATCGTACCTCAATGGGAGCCTCCCT
ATTCCACGTTCCAACTCGTCTCACGTTATACTCCCACATACCACCCCTACACATCAGACA
CTAGCCGGGGGTGCGCCCACCCACCGCCTATACCCCCACCTCCATCGCGTCCTCCCCAGA
CACCTTGAAAACCCCTCAGAT
GenBank Accession FR814248 [GenBank]
Graphic View Graphic view of gene At4g13095
Predicted Position of Insertion Chr4:7635482 - go to primer design
BLAST e Value 6e-11
Hit Clone Code (BAC ID) F25G13
Hit Gene Code At4g13095 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation low-molecular-weight cysteine-rich 37
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37