SimpleSearch - Line and FST details


Line specific information

 
Line ID 665D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N463787)
Segregation Analysis 50:50:50
Confirmed for Hit At3g23970
Parent of DUPLO pair none
Parent of pair(s) 12650

Gene hit At3g23970

 
Sequence (A. th genome BLAST matches underlined) 
>52-K023518-022-665-D07-8409
ATTCCTTCTTAATCAAATATTCGTCACATTTTGAGGGTTTGGATCTAATTGCATATGTAA
CTGATTTCACCTGATGCTCTACTTACCCCTGATGAGCATAAGCTTGTACCATCCATACAC
TTGGCCTCCCCCACCCATTCCCTGCGATTACTTGGCTCTTTATTCCTCAAGTTAAACAAA
ACCATACCTTTCTTGTTTCTGCTCCACTAGTAGATGATCTCAGACTTCTTAGGATGCATC
ACCACCGGGAAGTAATCCATACCTATGGGATCCTCCCTATACTGAGGGGATCCTCCCTAT
A
GenBank Accession BX894349 [GenBank]
Graphic View Graphic view of gene At3g23970
Predicted Position of Insertion Chr3:8660489 - go to primer design
BLAST e Value 2e-41
Hit Clone Code (BAC ID) F14O13
Hit Gene Code At3g23970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g26330

 
Sequence (A. th genome BLAST matches underlined) 
>52-K023517-022-665-D07-8409
TTCGGAATGAGCCATTTATACTTGATCTCTCTATAAATTTAATTTGTGACTTAAAAGTCT
CAATGATTAGGGCGTGAGTGGTACTCTTTACTTTACACCTAAAGCTTACGCACTTAAGAA
TTATGAATGCTATGGGATCCTCCCTATAGTGAGTCCTCTTACTCTTGCCAGCGATTAAAT
GGGTTGAGACTCCGCAAGATACTCTCAACCGTGCCTTTCGTGATTCAGCTCCCTTCGTAG
ATGATCCGCACACTTCCAGCGATGCATCACCGCCGGAAAACCAAACTTAAGA
GenBank Accession BX894348 [GenBank]
Graphic View Graphic view of gene At5g26330
Predicted Position of Insertion Chr5:9242266 - go to primer design
BLAST e Value 7e-51
Hit Clone Code (BAC ID) F9D12
Hit Gene Code At5g26330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cupredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37