SimpleSearch - Line and FST details
Line specific information
| Line ID | 670E09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N464281) |
| Segregation Analysis | 50:49:49 |
| Confirmed for Hit | At5g47670 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2701 |
Gene hit At5g47670
| Sequence (A. th genome BLAST matches underlined) | >61-K101716-0022-670-E09C-8409 TTTACATTGAATATATCCTCCGCATGATCCGTATCACGTTGGCAATAGGCATGAACCTGT CTTGCTCCCTCACCGTGCACTCCTCCTCACCACCATTACTGGTTTTGTTAGGCTGGTTGA ATTCTGGAGGACGCATACTGCCCTCTGCCATCAGAAAATTCGCTGCTAATCCTAACAAAA ATAAGAAAAATGGAAGTTTTAGTGCATAATGGCTTCGATGACGTCTGCATGCGCGGTTTA TAAGATTGAAAAGCTATTTCATTAACTGTTCGTCATGAAAAGAGTACAGACATGACAATG GAGGGATTGCAGAGAATGGTTTCGCATGCAACTGAAATGAAGAGAGCCTGTGAAAAGAGG GGGTATAGAGAATGGCACTACCTGGTGGAGAAGGAGTGGTGTTGTTCACGGACAGCTTGC GGTAGCCATGGAAGCCTCCACGTTCCATATCTTTCTTGTTCTAAATACACGACTTTTGTG TTTGTGAATATCCCTATNAATAATAATAACCAATGCCCGAAATTAAGAAGCATTTGAAGA AGAGAATGGAATGAGAGAGAAGAAAGAGTAATTGGAATAAAGCTAATAGTGTTGGCAAGT GTCAGCATTTGTAATTCAAGACCTCA |
| GenBank Accession | HE664974 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19315494 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MNJ7 |
| Hit Gene Code | At5g47670 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nuclear factor Y, subunit B6 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T30B22
| Sequence (A. th genome BLAST matches underlined) | >69-K022988-022-670-E09-8409 ATAGAGAGTACAAAGATGAGGAAACCCAGCGCATGCGGATCCTCCCTATAGTGCAGCCTC ACCACCATTAACTGGTTTTGTAAAGATGTAAGAGTGAGGCAAAAAAACGACACAACCGAA AGAAGAAAGAAATAAAGGGGAAAAACCGAACAAGAATACGAAAGACGGAAGTATCATCCC TGCAATGAACCCGAACCCGGCGCCATGCAACCGACACGAACAAAAAAAAGACACACACCT GCACCACGCACGCCCAAGCCACGATCTAGCCCCCACCCCCCAGCACCACCCCCACACCCC AAGCCCAACATACACCCCACAAACCAGCGCGCGCAACACGAGGAGCACCAAGGCACACCG CCAAGCACACCACAAGCATCCAACCACAAATAACCACCAACAGACCCGCGCCAGAACCAA CCACAAAACGGCTACCCGCCCCGGCCCCGGAAGCAAGACGAAGAGCCTCCAGCACACCCA CCCGGGCCAGAGCAATACCCCACTCGCCGCAAAGGCAG |
| GenBank Accession | BX661070 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:19515446 - go to primer design |
| BLAST e Value | 0.060 |
| Hit Clone Code (BAC ID) | T30B22 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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