SimpleSearch - Line and FST details


Line specific information

 
Line ID 675G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N464777)
Segregation Analysis 50:47:46
Confirmed for Hit At1g34540
Parent of DUPLO pair none
Parent of pair(s) 332, 7333

Gene hit At1g34540

 
Sequence (A. th genome BLAST matches underlined) 
>07-K023061-022-675-G01-8409
TTGAATATACCTGTGATCCACTAGCTAGGCATCTAGACCATAGATGTAAATATGGGACCC
TCCCTATACCGAGTATGCCTCTGATATCATGGACCATTAAATGATATGATCATGAAATTT
TTGGTTGATCATCGCATGGGATCCTCCCTATAGTGAGACCTCATCCCACCTCTCTTGTCC
ACACGATCACAATCTCTCCCCCAAATACTCACCTTCCTTCCCATTGTAATTATGTTATAC
CTCATTGCCTGCCCTTGCACCCCCTAACGTCCCATCACTCAATACCTTGACCTCAACACA
ACTCTTCATGTCCACTGGCACTTGCTGGATACAATCTTACAGATTCACTTATACCAGCGT
GAACATAATTCATC
GenBank Accession BX661461 [GenBank]
Graphic View Graphic view of gene At1g34540
Predicted Position of Insertion Chr1:12638443 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) F12K21
Hit Gene Code At1g34540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 94, subfamily D, polypeptide 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g16525

 
Sequence (A. th genome BLAST matches underlined) 
>07-K022948-022-675-G01-8409
TCCTGCCCTATATATGGTAGTTTTTTCAGTGGCGAACCCATGTATGCCACTGATATCATG
GACCAATAAATGATATGATCATGAAATTTTTGGTTGATCATTGTATGGGATCCTCCCTAT
AGTGAGGTCTACTCCCCAAATATCAAACATACCGTCTCACAAGACCACAGGGCACTTGAG
ACTTTTCAACAAACGGCAATATCCCGACCCCTCCTCGCATTCCCTTGCCCAACCATCTG
GenBank Accession BX661460 [GenBank]
Graphic View Graphic view of gene At3g16525
Predicted Position of Insertion Chr3:5621746 - go to primer design
BLAST e Value 9e-44
Hit Clone Code (BAC ID) MDC8
Hit Gene Code At3g16525 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37