SimpleSearch - Line and FST details


Line specific information

 
Line ID 679F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N465158)
Segregation Analysis 50:50:43
Confirmed for Hit At5g37350
Parent of DUPLO pair 12463
Parent of pair(s) none

Gene hit At5g37350

 
Sequence (A. th genome BLAST matches underlined) 
>78-K023962-022-679-F10-8409
ATATGACACATATCAATTGGATACGNGGGGGGNNANAANCCCTTTGGACTTCCCGTTCCT
GGGTNATCCAATANCTCACAATCACACTTTCCAGCCACACAAAACCTACCTGAACCTAAA
CCCTATAAACTCAATGTTCATTTGAGCAGAGACTATGAGCAATTCAGAAGCTATTTCAAA
TGTAAAGATCATATCTTTATAAAAAATTGGGGGGGGGGGGGCGGATTCCACACAATAATT
CGATAAGAAACGGTACCTCCATGAGGAGAAGCACGAACGTGACTAGGAGATCCTCGCTAT
AGTGAGATTTGGTACAAATCAACAAGCTGAGAAAATGCTTCCATGCAACGAGAACGTCTT
GCTCGACGATGCGAAAGGGAGACAGGGAGTATGAAGAGAGTAAAGGAACAAATTAGAGCT
AGGGAGTACTGGGGGAGGGAGAAAAATACGACCGAGACGTGTAAGAAAGAGAGTAGTGGC
AAATTCTAGGGAGTGAGGGCGAAATAAGGGAAGAGATAAAGAAGAAGTGGATCGGAGCAA
ATCTAAGAG
GenBank Accession BX894605 [GenBank]
Graphic View Graphic view of gene At5g37350
Predicted Position of Insertion Chr5:14793566 - go to primer design
BLAST e Value 3e-62
Hit Clone Code (BAC ID) MNJ8
Hit Gene Code At5g37350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Serine/threonine-protein kinase Rio1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX661866 [GenBank]


Last Updated on 10.06.2021 13:37