SimpleSearch - Line and FST details


Line specific information

 
Line ID 686D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N465800)
Segregation Analysis 50:48:41
Confirmed for Hit At1g78460
Parent of DUPLO pair none
Parent of pair(s) 92875

Gene hit F24D7

 
Sequence (A. th genome BLAST matches underlined) 
>28-K022973-022-686-D04-8409
TAGAATGACGAATACATGTAATGGTTAAATACTTTTTTTAGGTCTGGAGCAAATATTTTT
GAAATTATATTACTCGAACAGAATCATATCTCACAAAAATATACTTTGATATTGCATGTT
CACCTAATATAATCTTCATAAATCTGTTGGTTCATAAACTAATATGTGTATAATACACGT
ATGGGATCCTCCCTATAGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GenBank Accession BX662134 [GenBank]
Graphic View Graphic view of sequence BX662134 of line 686D04
Predicted Position of Insertion Chr1:23631180 - go to primer design
BLAST e Value 4e-83
Hit Clone Code (BAC ID) F24D7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g78460

 
Sequence (A. th genome BLAST matches underlined) 
>28-K022872-022-686-D04-8409
GGATGTCTACTAGTCCTATCCCCTCCCTATCCATGACTCAAGCCACCAAAACCGGTTTCC
GACGGCAAGTGACTAAATCGGATATATCGGACTTGGTGAAT
GenBank Accession BX662133 [GenBank]
Graphic View Graphic view of gene At1g78460
Predicted Position of Insertion Chr1:29519097 - go to primer design
BLAST e Value 9e-32
Hit Clone Code (BAC ID) F3F9
Hit Gene Code At1g78460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SOUL heme-binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37