SimpleSearch - Line and FST details


Line specific information

 
Line ID 687C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N465884)
Segregation Analysis 50:32:17
Confirmed for Hit At5g12850
Parent of DUPLO pair 12055
Parent of pair(s) none

Gene hit At5g12850

 
Sequence (A. th genome BLAST matches underlined) 
>27-K023113-022-687-C04-8409
TGAATATGAATGTGTGCAAGGCCATTGACTCATGGTGTCCCTGATTGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGATACCCATTTCATCTTCAAATTGGACTGACATTATCCCAAAATA
TACACTCATATACATAAATACTNACAACTCCTTCTACCCAGATACCCATTTCATCTTCAA
ATTGGACTGAGAATCACGCAAGAACACACCTCACACCATACATAGCTACAATACGACCAA
ACA
GenBank Accession FR814571 [GenBank]
Graphic View Graphic view of gene At5g12850
Predicted Position of Insertion Chr5:4059067 - go to primer design
BLAST e Value 0.014
Hit Clone Code (BAC ID) T24H18
Hit Gene Code At5g12850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CCCH-type zinc finger protein with ARM repeat domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR814571 [GenBank]


Last Updated on 10.06.2021 13:37