SimpleSearch - Line and FST details


Line specific information

 
Line ID 692F02
Vector Used pGABI1
Line Availability available as T3 set from NASC (N466398)
Segregation Analysis 50:38:34
Confirmed for Hit At2g40390
Parent of DUPLO pair 12418
Parent of pair(s) none

Gene hit At2g40390

 
Sequence (A. th genome BLAST matches underlined) 
>14-K025071-022-692-F02-8409
TTTTTCGAGTAATTAGCATGGTATATTTTTCCGAACGTAAATCCTGTGGTTCAATTGGAT
TACACCTTCCAGTTGATGATAGTTTAGCGAGAAGAACAATCTCTCGTCGTTTAGAGAACT
ATTTACGCTCTCCATTTCCATTGCTACCACAGGACAATACATATGAACTTTCCATAGACC
TTGAGTCGAGAAAGCATATGAAAACAAAGGAGAAGGAGACTTGAGATGCTGAAACGCTTT
GATCTCGATGATCCAGTTGGTTATTGCAAGGTTCAGCGATCTCATCCATTGTTCTTCAAG
GTTAGAGCCTAGTTGCACCATGAGCAACTTAGAGCCCTGCCTTGACCTACAAGTTACCAG
CTGATCTTTCACCGTTTTGAGACAAGTTGTTCTCAGGCTCGTTGGCGCCTCGTAGATGCA
GATGAGGAACACGAAAGTGAAGAAAGCGAGGTTGAAAACGTCTTTGAGGTTAGAAGTGGA
GCCTAGGTTTTGGAGTTGGATTGAACAAGTGGTTCTCTTGACGTTATAGTTGAGAACAAC
GTCGACAAAACCCATCAATAGAGTAGATATGACGTTTTCATTG
GenBank Accession BX943799 [GenBank]
Graphic View Graphic view of gene At2g40390
Predicted Position of Insertion Chr2:16868193 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T3G21
Hit Gene Code At2g40390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation neuronal PAS domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX943799 [GenBank]


Last Updated on 10.06.2021 13:37