SimpleSearch - Line and FST details


Line specific information

 
Line ID 693A12
Vector Used pGABI1
Line Availability available as T3 set from NASC (N466444)
Segregation Analysis 50:50:36
Confirmed for Hit At5g43720
Parent of DUPLO pair 39
Parent of pair(s) none

Gene hit At5g43720

 
Sequence (A. th genome BLAST matches underlined) 
>89-K025068-022-693-A12-8409
AGACCTCCACATTCAAGATTCTCATATGGGGTTTGCTTCGAAGAGACCATATATGATCCA
ATTCTCTACAAAGACACAGGCGAGAAATGACGTTATCAACCTTAAGCTCTACACTAGACA
AGCTAACTGAGTCACCAGAAAGACCGGAACTTAAACACAAATTCTACCAAAAAACACTAA
TTTACAGAGAAAAGGAACTGACTTTACGAAGAAAGCGTTCAACAGAACGCATCTGATTCT
TGATGGAGACAGCTCTTAGGTATCTTCTCCACTCACCATACTTTCAACAGCCGACTGCTT
CCTGCTGTCTGAAAAAGAAAGGACTACCTCCCTACTTGACATAACAAGAGTGTAGATATG
CTTCGTTATATCACAGTGGTATGAGGCACTAAATATCTATATTTAGTA
GenBank Accession BX943865 [GenBank]
Graphic View Graphic view of gene At5g43720
Predicted Position of Insertion Chr5:17558864 - go to primer design
BLAST e Value 6e-116
Hit Clone Code (BAC ID) MQD19
Hit Gene Code At5g43720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rRNA-processing EFG1-like protein (DUF2361)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX943865 [GenBank]


Last Updated on 10.06.2021 13:37