SimpleSearch - Line and FST details


Line specific information

 
Line ID 694B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N466551)
Segregation Analysis 50:48:38
Confirmed for Hit At1g56030 At1g70090
Parent of DUPLO pair none
Parent of pair(s) 5261, 5289, 5300, 5373, 97037, 97041, 97046, 97053, 97054

Gene hit At1g56030

 
Sequence (A. th genome BLAST matches underlined) 
>34-K024552-022-694-B05-8409
ATTTACATTGAAGCCATTTTTTCTCAGAACGATAAAGAAGACAAGTGTGGCTTTTGTAGG
CACACCTAAAACGCCATGAAAAGCCAAACATACGAAAGACCAAGAAATATTAGAGAAATT
AATATGTTCCCACTTTTTTCGCTATGGGATCCTCCCTATAGTGAGATGGATTATGCTCTT
CTCCCGATGGTGAAGGTTATAGCATGCTCTCCTCTGAAATTTCGATCCTCTCCGTCTACC
TATGGTATACTCCCTATAATGCGTCGGATTACTCACCGGGCTCCAGGGGATGGTTTTTCC
TGTGGGCCCGCCCCTAAAATAGGCCCATTTAGACGGTTAAAAACCCTACCAGATTTTTGG
AGAGAAAGGCAGGTTATCTTATTGTGCAGGTTGAAGGGACTGCACTTGTGCCAAGGAGAG
GATTTCATCCTCAGAAGGGGGGGAGATTATGCGAACATACAGACTGGAAGTGATAAATAC
GGACAGTTTGACCTAAAAAATCAGAGGAGCCAATT
GenBank Accession BX943998 [GenBank]
Graphic View Graphic view of gene At1g56030
Predicted Position of Insertion Chr1:20956911 - go to primer design
BLAST e Value 7e-63
Hit Clone Code (BAC ID) F14J16
Hit Gene Code At1g56030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box protein
Insertion Classification 3' region
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g70090

 
Sequence (A. th genome BLAST matches underlined) 
>34-K024557-022-694-B05-8409
CCACATTTTACGATATGGAATCCTCCAAACCGTGACGTAGATTCTCTTCTTCTTCTGTAT
CTGCATCCAAGTTTCAAGCTTTTCTCTGTAGTTTCCTTCTCTCCATCTAACTATGGGATC
CTCCCTATAGTGAGTCGTATTACTCATGGCATTAGACTGAATTGGTACTCCAA
GenBank Accession BX943999 [GenBank]
Graphic View Graphic view of gene At1g70090
Predicted Position of Insertion Chr1:26401914 - go to primer design
BLAST e Value 1e-36
Hit Clone Code (BAC ID) F20P5
Hit Gene Code At1g70090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucosyl transferase family 8
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37