SimpleSearch - Line and FST details


Line specific information

 
Line ID 697F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N466881)
Segregation Analysis 50:31:21
Confirmed for Hit At4g28000
Parent of DUPLO pair none
Parent of pair(s) 2802, 41330

Gene hit At4g28000

 
Sequence (A. th genome BLAST matches underlined) 
>38-K024555-022-697-F05-8409
TCTCGCTTTACAAACATCTGAATCTTCTCTTTATGAACTAATTATTGTGAATGTTATACA
AACAGAACTTTTGCACAACAGCAGCATATCGACCAGTGAGGGAGCTGATAAAGCAAGAGT
GCTTGAAAGACCAGGTAAGAACTCCTAAAACTCGTCCTTCCTTTATTTCTCTACTTTCTA
TGGCATCGTCACCATCCCGAGAGTGAGTCCTATTNCTCCTTGCCCATTTTCTGTATACTA
ACCCTTCTCCCTTTTCTCCCTTTTAATACTTCTCTTTATTAACTAATTATTGTGAATGTT
ATACCAACCCAACTTTTTCTCAACANCAACCTATCAACCAATTATTCTAACTCATAAAAC
ATCATTTCTTCAAAAACCANTTAAAAACACCCCAAAACCCCTCCTTCCTTTATTTCTCCA
CTTTCTACCNCNTTTTCTTCCTTCTCACCAAGACGAAGACGTCCTGCTCCTCGGGAAAGG
GGGGAATCCTAAGCCTAAGCTTACATACATATAGAGGGAGAGTGAGA
GenBank Accession BX944395 [GenBank]
Graphic View Graphic view of gene At4g28000
Predicted Position of Insertion Chr4:13928737 - go to primer design
BLAST e Value 2e-97
Hit Clone Code (BAC ID) T13J8
Hit Gene Code At4g28000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX944396 [GenBank]


Last Updated on 10.06.2021 13:37