SimpleSearch - Line and FST details


Line specific information

 
Line ID 700B09
Vector Used pGABI1
Line Availability available as T3 set from NASC (N467125)
Segregation Analysis 50:36:5
Confirmed for Hit At3g56200
Parent of DUPLO pair none
Parent of pair(s) 3547, 8234, 8272

Gene hit At3g56200

 
Sequence (A. th genome BLAST matches underlined) 
>66-K025069-022-700-B09-8409
CCATTTACATTGAAGCAATTGAAGTAGATGTCAAGCTAGTCTTCATAGAAGTATCGTCGA
AGCTTCTACGTAGGCGAATTGTTGAAGTATGGGATCCTCCCTATAGGGAGAGCTGTGAAG
AGTTGCCAGAACGATCCTCCATTGCTCAACTCCGGAAACAGTCTTGGATTCTTCGTTTGT
CCATTCACCAGCGCGGAAATCGCCAGCACCGAGCTTATGACAACAAATAGAACCGCAAGA
AGAAACGATACAGCGGAACTAATTGCCAGTCTTTCTACATAACCATTAACAAAAAGAAAA
TCATCAACAATCTCATAGATATCCATAATTTTGAGAACACAAGATTATAGAGAGAAACTT
ACCGACTCGTCTACGCAGGACCAATGGAAGCAAGACAAAGCCGTAGACAAATAACAAAGC
GAAGATTCTCGTGTTCCACCAGTAAGAACCAAACCATTCTTGCAAAACTCCAATATGTTC
AGGACCACCATTTTCATTACCAGAAAGCACATCTCCTGAGAGAGTAAACACATACAAATC
CAAACTCAGCCAATCTGTTC
GenBank Accession BX944625 [GenBank]
Graphic View Graphic view of gene At3g56200
Predicted Position of Insertion Chr3:20851037 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F18O21
Hit Gene Code At3g56200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transmembrane amino acid transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g03710

 
Sequence (A. th genome BLAST matches underlined) 
>66-K025074-022-700-B09-8409
ATTGAAGCAATTGAAGTAGATGTCAAGCTAGTCTTCCAAGAAGTATCGTCCAAGCTTCTA
CGTAGGCGAATTGTTGAGGTATGGGATCCTCCCTATAGTGAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNN
GenBank Accession BX944626 [GenBank]
Graphic View Graphic view of gene At3g03710
Predicted Position of Insertion Chr3:922044 - go to primer design
BLAST e Value 5e-27
Hit Clone Code (BAC ID) T12J13
Hit Gene Code At3g03710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation polyribonucleotide nucleotidyltransferase
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37