SimpleSearch - Line and FST details


Line specific information

 
Line ID 701G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N467274)
Segregation Analysis 60:59:55
Confirmed for Hit At3g24120 At3g30300
Parent of DUPLO pair 2638
Parent of pair(s) none

Gene hit At3g24120

 
Sequence (A. th genome BLAST matches underlined) 
>15-K025352-022-701-G02-8409
TTGATGACTCTGAGAAGATTACTCGATTGTGTTTATGTTACAGACACCTTTGTATAGAAT
ACTTTGAGGACCGGCAGTACATGTACAGACTTTACTTCCTGATGCTAATCCTATGGGATC
CTCCCTATAGTGAGGATTCCTAATTACCTGTTATTAGATCTATCTTGGTTGATGACACCA
CACCTATGGTATCCTCCCTATAGTGCGATAAAATCTTACCTTCTCCCTTCATCTCTAATT
CGAGATGTGAAAGTGAAGTGAAGTGAAGTGGTTCTTTTGCTAATGGAGGACATAACAGAG
ACTATAGTGAGAGTAGAAGAAAAGTTGAATCGGAAGAGAGAGATAGAGACAACAGACTCG
TGTGAGCAACCTGTCTGGAGAACTAAATCGGTG
GenBank Accession CR356651 [GenBank]
Graphic View Graphic view of gene At3g24120
Predicted Position of Insertion Chr3:8707548 - go to primer design
BLAST e Value 3e-16
Hit Clone Code (BAC ID) MUJ8
Hit Gene Code At3g24120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Homeodomain-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g30300

 
Sequence (A. th genome BLAST matches underlined) 
>15-K025352-022-701-G02-8409
TTGATGACTCTGAGAAGATTACTCGATTGTGTTTATGTTACAGACACCTTTGTATAGAAT
ACTTTGAGGACCGGCAGTACATGTACAGACTTTACTTCCTGATGCTAATCCTATGGGATC
CTCCCTATAGTGAGGATTCCTAATTACCTGTTATTAGATCTATCTTGGTTGATGACACCA
CACCTATGGTATCCTCCCTATAGTGCGATAAAATCTTACCTTCTCCCTTCATCTCTAATT
CGAGATGTGAAAGTGAAGTGAAGTGAAGTGGTTCTTTTGCTAATGGAGGACATAACAGAG
ACTATAGTGAGAGTAGAAGAAAAGTTGAATCGGAAGAGAGAGATAGAGACAACAGACTCG
TGTGAGCAACCTGTCTGGAGAACTAAATCGGTG
GenBank Accession CR356651 [GenBank]
Graphic View Graphic view of gene At3g30300
Predicted Position of Insertion Chr3:11924046 - go to primer design
BLAST e Value 1e-67
Hit Clone Code (BAC ID) T6J22
Hit Gene Code At3g30300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-fucosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37