SimpleSearch - Line and FST details
Line specific information
| Line ID | 706F07 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N467747) |
| Segregation Analysis | 50:34:31 |
| Confirmed for Hit | At3g26310 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6146, 6206, 7782, 10534, 10536, 10592, 11397, 71049, 71051, 71053, 71054, 71055, 71056, 71058, 71061, 71062, 71064, 71066, 71067, 71068, 71070, 71072, 71075, 71076, 71078, 71079, 71080, 71081, 71082, 71085, 71086, 71088, 71089 |
Gene hit At3g26310
| Sequence (A. th genome BLAST matches underlined) | >54-K025108-022-706-F07-8409 CGCGAAGAAGCCATTTACATTGAATGTATACTTGTAGCGGGCTATGAATGTTGTGGATTC ACAGAAAGGAAGCCGTTCCTGAAAATGATAAACTTACAAGAAACCATATCCTAGCAGTCT TGCTGGTAACTAAAACAAGATTTAGCTAACAATCCTTTATGTAATGTAGTAGTATGGGAT CCTCCCTATAGTGAGATNGNTTTGNCANATGACCTCCGGATTAGGAAAGTATGTTACCCC CCATATAGAGAGGACCTATTCCCCCCACACCCGCTCCCACCCCACTCCTGAGAATCCTTA ACCCCCCCAGACCCCCCCTCCCGATCCATCCCCCTCTCCCAACTCTCACAATCATCCCCT GACATTTTCCCTCCAAACTACATTCCTCCTCTATATAACATCCTAAATCA |
| GenBank Accession | BX945242 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:9641870 - go to primer design |
| BLAST e Value | 9e-38 |
| Hit Clone Code (BAC ID) | F20C19 |
| Hit Gene Code | At3g26310 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 71, subfamily B, polypeptide 35 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g08090
| Sequence (A. th genome BLAST matches underlined) | >54-K025040-022-706-F07-8409 ATGAACCATTTACAATTGAATATATCCTGATCCATGATAGAATGTGTGTGGATTCATGAA TAGGGACGATCCCAAAATCGAGCTCACGTAGAAGTAGAAATCCAGTGTATGTAGTTTTCA TTTGGCGTTTATTTCGTCAGTTGGAAAGTATGAGAAGTGAGTATTGAGGGATATAGATGT TGAGAATGGTAGCTTTGGCAGTGCTGAGTTTCCATGTTGTTGATGTTTCAATANGATATT AATTGGAGATAATTTCAATAGTTTGCTCTAAACCCCTTAGTTGGCAATTCTTTTGACTTC CAAAGTTCATCATCCTGGTATGGGATCCTCAATATAAAGAGATATAAATAAAAAA |
| GenBank Accession | BX945241 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2526309 - go to primer design |
| BLAST e Value | 4e-123 |
| Hit Clone Code (BAC ID) | T6D22 |
| Hit Gene Code | At1g08090 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nitrate transporter 2:1 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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