SimpleSearch - Line and FST details


Line specific information

 
Line ID 710G07
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468143)
Segregation Analysis 50:49:45
Confirmed for Hit At2g17390
Parent of DUPLO pair none
Parent of pair(s) 12067

Gene hit At1g12930

 
Sequence (A. th genome BLAST matches underlined) 
>55-K022876-022-710-G07-8409
CTTGATCCATATCTTTTAAATTCAACTGATGAGACGGATCATTTTATATCTCCCGTTGTG
AACAGTTTAACTCTCATTTATTTATGTTGAATCTATGAGGCAAATCATTAAACGGGACTC
CATGTGGAAGACCCTTGGTCGTGTAGACTACAGACAGCTCCACTTTTCACGTAATTGCGC
CCTTTGACTTAAGACAAAGCCCATTACCTTGTTTTCCATGAGGTTTGCCACGAGATCATC
TCGTGATTGGGTTGCGACATAAAATTTGGGGAAAACCCTAGGCCAGTCCATTCTGGGATG
AAACAGGCCCCCGGAG
GenBank Accession BX663109 [GenBank]
Graphic View Graphic view of gene At1g12930
Predicted Position of Insertion Chr1:4398437 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) F13K23
Hit Gene Code At1g12930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ARM repeat superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g17390

 
Sequence (A. th genome BLAST matches underlined) 
>55-K023050-022-710-G07-8409
TGGGATCCTCCCTATAGTGAGCCTATATGTGGATACTATCTCTCTCTCGATGTGGAGAAT
CTTCTCGATAAGGACGCTTTCCTCTGAGCTGCTTTGACTCTTGAAGGATATGTTTCTTCT
CTGGGGTGTAATAGCGTCACATACTCTGATTGCCACCTTGACTTT
GenBank Accession BX663110 [GenBank]
Graphic View Graphic view of gene At2g17390
Predicted Position of Insertion Chr2:7557610 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) F5J6
Hit Gene Code At2g17390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ankyrin repeat-containing 2B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37