SimpleSearch - Line and FST details


Line specific information

 
Line ID 711C08
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468192)
Segregation Analysis 7:7:7
Confirmed for Hit At5g17780
Parent of DUPLO pair none
Parent of pair(s) 11099

Gene hit F26G5

 
Sequence (A. th genome BLAST matches underlined) 
>59-K022877-022-711-C08-8409
ATTGAATATATCCCGTGGTGATCAATGAGAGTAGTTCTACCTCTTTATTGATTTAGATTG
TCCTCGCAACAATTTGCAACCTCTTTTGTCTATTTTGGATGATATATCTC
GenBank Accession BX663182 [GenBank]
Graphic View Graphic view of sequence BX663182 of line 711C08
Predicted Position of Insertion Chr3:15863768 - go to primer design
BLAST e Value 2e-29
Hit Clone Code (BAC ID) F26G5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g17780

 
Sequence (A. th genome BLAST matches underlined) 
>59-K022962-022-711-C08-8409
CCATTTACATTGAAAAAGTAAATGGCTTCATGAAGCCATTTCCCTAGTATACTCATTCCT
CCGTTGCTATGGTATCTTCCTTATATCATATTTAGTCTTTGTAGTGTTAGGTTCTGAATT
TCGAATCTTTCCTCTTCCCTTATTGAAAAGAGTAGAAGACAAAGAACAAGGTATGGGATC
CTCCCTATAGTGAGTATCGTATCCACATGATCTTTCAATGTATAGAGACTATCCCTTGGC
TTAGGACTCTCCCCGAATCCCAAAAGATCGATCGCGAGGAGCCTATAATCATCTTTTTGA
ATGTGTTCAAATACAGTTTCTGTCCAAAAATGTGATGACCCCATAAAACCGTGTATGAAT
ATTACATTCTCGGACGGCTCTTGAACAGAGTATGGGATCCTCCCTAT
GenBank Accession BX663183 [GenBank]
Graphic View Graphic view of gene At5g17780
Predicted Position of Insertion Chr5:5868091 - go to primer design
BLAST e Value 8e-106
Hit Clone Code (BAC ID) MVA3
Hit Gene Code At5g17780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX663184 [GenBank] BX663184 [GenBank]


Last Updated on 10.06.2021 13:37