SimpleSearch - Line and FST details


Line specific information

 
Line ID 713F07
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468419)
Segregation Analysis 50:48:34
Confirmed for Hit At3g16540
Parent of DUPLO pair none
Parent of pair(s) 4130, 4277, 9938

Gene hit At4g21460

 
Sequence (A. th genome BLAST matches underlined) 
>54-K022880-022-713-F07-8409
CATTTACATTGAATATATCCATGTGGAGTTATTGAAGCACTTCTACAGAGAAGACTTGTA
GACGAACACGCAGAGACTGATGATGAATTGATGGAAAAAATCGAGAGTCTACCTTTCAAA
GATGATGTCCAGGATGAACATTTTGAATATGATGTCGAGGAAGCGCATTTTACTGACGAA
GAACTTGAAG
GenBank Accession BX663457 [GenBank]
Graphic View Graphic view of gene At4g21460
Predicted Position of Insertion Chr4:11429033 - go to primer design
BLAST e Value 2e-69
Hit Clone Code (BAC ID) F18E5
Hit Gene Code At4g21460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S24/S35
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g16540

 
Sequence (A. th genome BLAST matches underlined) 
>54-K022964-022-713-F07-8409
AGCCATTTACAGCAAAGTTCAAAAGATTTCACATGAATGTGATTTGGCCATCTTGGAGAT
CGATAGTGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGCTTGGAGACATACCACCTCT
CCAAGAAGTTGTGTCCGTTGTTGGTAATATATCATATGGAGACATATCATGCATGTTTCC
TACGATCTTATAATTCATATTCCAATATACCATAAAATTATGCTAAATGATGAAATTTTT
CTTATGATTTGGTTAGTAGAATTATATTAATGTGCTCAAAATGCAGGTGGTGAAAATATC
TGCATTACAAAAGGTCTAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX663458 [GenBank]
Graphic View Graphic view of gene At3g16540
Predicted Position of Insertion Chr3:5628264 - go to primer design
BLAST e Value 4e-169
Hit Clone Code (BAC ID) MDC8
Hit Gene Code At3g16540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DegP protease 11
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37