SimpleSearch - Line and FST details


Line specific information

 
Line ID 718G01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468905)
Segregation Analysis 50:49:33
Confirmed for Hit At5g05370
Parent of DUPLO pair 1798
Parent of pair(s) none

Gene hit At5g05370

 
Sequence (A. th genome BLAST matches underlined) 
>07-K025307-022-718-G01-8409
ATCTATGAGAATTTGTCTCAGAAGAATTGCCCTACTACCATTTTTGCTGTCTTACTCCAA
TAAAACTATAACCCAATTGAATCGTACCAACTTCCCATAACAATCAGATTGTTGATCATC
ATAATCATCACATCGAAGTCCACATGATTGATACATCATATCTGTTTGTTAATTGCCTAT
ACCGAGAGAAAGAGAAAAACGTATGGGATCCTCCCTAGAGTGAGCTGAATGATTCGTGAC
ACCAAATGCGCGTCTCTCCTGTGTATATGGAAAAGGAACCTCTTGTTTGAAACATAAACA
AATGTGAGAGGTCATATGTATAGTAGTATTGAATTTACTTGATCAAATCCTTCTCGTTTT
CTCTTAGATGGATGGTTTGACTGTGAATTCTCTTCTCGGCAGAATGCTCGTATGGGATCC
TCCCTATAGTGAGNNNNNNNNNNNNNNNNNNNNN
GenBank Accession CR357264 [GenBank]
Graphic View Graphic view of gene At5g05370
Predicted Position of Insertion Chr5:1591498 - go to primer design
BLAST e Value 7e-66
Hit Clone Code (BAC ID) K18I23
Hit Gene Code At5g05370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cytochrome b-c1 complex, subunit 8 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g05230

 
Sequence (A. th genome BLAST matches underlined) 
>07-K025281-022-718-G01-8409
GNAGCCATTTACATTGAATATATCCTGGATTTTGGTTTTAGGAAGTATAAATTTTATTGA
CATATTATATTTTACGGATACCAATACATACTAGAGGTTTCTTATATGCTCAAGGCATGA
GCGACACCCTATCATAACCCTAATTCCCTTATCTGGGAACTACTCACCCATGATTATAAA
GAGAGATAGATTTGGACAGAGAGACTGGTGATTTCTGCGGGCATGCCGGTATGGGATCCT
CCCTAGTTTCGAGAACGACCTGAATGATTCGTGACACCAAATGCGCGTCTCTCCTGTGTA
TATGGAAAAGGAACCTCTTGTTTGAAACATAAACAAATGTGAGAGGTCATATGTATAGTA
GTATTGAATTTACTTGATCAAATCCTTCTCGTTTTCTCTTAGATGGATGGTTTGACTGTG
AATTCTCTTCTCGGCAGAATGCTTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR357263 [GenBank]
Graphic View Graphic view of gene At5g05230
Predicted Position of Insertion Chr5:1553239 - go to primer design
BLAST e Value 2e-106
Hit Clone Code (BAC ID) K2A11
Hit Gene Code At5g05230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37