SimpleSearch - Line and FST details


Line specific information

 
Line ID 722H01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N469301)
Segregation Analysis 50:46:33
Confirmed for Hit At2g24360
Parent of DUPLO pair 6755
Parent of pair(s) none

Gene hit M4I22

 
Sequence (A. th genome BLAST matches underlined) 
>08-K026186-022-722-H01-8409
AACATAAACAATGTGGCTTAAAGTGATAGCGCACGTATGGCATCCTCCCTATTGTGAGCT
TATTAAAACCTCTCATAAATAAAATTTGCTATTGAAATATTAAATCTGTTGAATCATGTT
TATCTAAGATACAGATAAAAGGTATCGTAACATTTAAACTGTCTCAGAATTGATAATAAC
CTATTTTATTGTCACAAAATTGAAAATAATTCATCATATATTTGAAAGCGTATGGGATCC
TCCCTATAGTGAG
GenBank Accession CR398399 [GenBank]
Graphic View Graphic view of sequence CR398399 of line 722H01
Predicted Position of Insertion Chr4:13665399 - go to primer design
BLAST e Value 2e-91
Hit Clone Code (BAC ID) M4I22
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit CR398399 [GenBank]

Gene hit At2g24360

 
Sequence (A. th genome BLAST matches underlined) 
>08-K025198-022-722-H01-8409
NNTTTCGTGGATATTCGGACATGAGCCATTTACAATTGAATAATCCTGCAGAAATAAACA
ATTGGCTTAAAATGATAGCGCACGTATGGGATCCTCCCTATTGTGAGCTTATTAAAACCT
CTCATAAATAAAATTTGCTATTGAAATATTAAATCTGTTGAATCATGTTTATCTAAAATA
CAGATAAAAGGTATCGTAACATTTAAACTGTCTCAGAATTGATAATAACCTATTTTATTG
TCACAAAATTGAAAATAATTCATCATATATTTGAAAGAGTATGGGATCCTCCCTATAGTG
AGNAAAAGGCACAGTTCATGGAACAACAGTTTCAGCAAGAGGTGTCTATGCTTGCTAATT
TGAAGCACCCAAACATTGTGAGGTTCATTGGTGCATGTCGCAAGCCAATGGTGTGGTGTA
TAGTGACTGAATACGCCAAAGGAGGTTCAGTGAGGCAGTTTTTGACTACGAAACAGAAAC
AAACCTTCCCTTTAAAGTTAATTTTTACCAGTCTTCCCATGATAACTAAAATGA
GenBank Accession CR357861 [GenBank]
Graphic View Graphic view of gene At2g24360
Predicted Position of Insertion Chr2:10365821 - go to primer design
BLAST e Value 6e-91
Hit Clone Code (BAC ID) T28I24
Hit Gene Code At2g24360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37