SimpleSearch - Line and FST details


Line specific information

 
Line ID 724A02
Vector Used pGABI1
Line Availability available as T3 set from NASC (N469410)
Segregation Analysis 50:48:46
Confirmed for Hit At4g09200
Parent of DUPLO pair none
Parent of pair(s) 68186, 96968

Gene hit T18B16

 
Sequence (A. th genome BLAST matches underlined) 
>09-K025363-022-724-A02-8409
TCCGGAATGACCATTTACATTGAATATATCCTGTTTAGCTTTAAACAGACAGGACCAAAG
TTAAAAGAGTAGAATTGAGCAAGATTATCGTGTTTGGATAATTGAATGCGATCGGGGCTT
ACTTTTTCGGTTTGAACCAAAGTAAAACTGAAAAATCATTTCTAAAAATCCAAATCTCAT
TCGGTTACTTGGTTCTTAGCAGGTATGGGATCCTCCCTATAGTGAGTAAGGCGACCAACA
TAACCAACAAAGTGAAAAGTTACTTCTACGAGAAACATGTAAGAGCATATAACCTGGTGT
ACTACAGGAAGCGATTCGAGCTACACATCAGCACACAATATACCAGCTGCCGGCTTAGTA
TGAGCGAGTGCTGAAACAGCTTGAACCCACCTGCTCACTCTATGCTCGTGAATAAAATCT
TGACTTTATCTGATTTTCTTTTTATCTTTACACTTGACAGAGCCATTGTGTAAACTCAAA
TGAACAAAGACTAGCGATAATACTTTAACTTGTAATCACAA
GenBank Accession CR358016 [GenBank]
Graphic View Graphic view of sequence CR358016 of line 724A02
Predicted Position of Insertion Chr4:10480402 - go to primer design
BLAST e Value 9e-87
Hit Clone Code (BAC ID) T18B16
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g09200

 
Sequence (A. th genome BLAST matches underlined) 
>09-K025362-022-724-A02-8409
ATCCTGTTTAGCTTTAAACAGACAGGACCAAAGTTAAAAGAGTAGAATTGAGCAAGATTA
TCGTGTTTGGATAATTGAATGCGATCGGGGCTTACTTTTTCGGTTTGAACCAAAGTAAAA
CTGAAAAATCATTTCTAAAAATCCAAATCTCATTCGGATACTTGGTTCTTAGCAAGTATG
GGATCCTCCCTATAGTGAGAGTGTGAAACTATANAAGAATCAGGTGCTGCATATCTTCTA
GGAGAAACACAGAAGAACATAGTAGCAGCTGCAGTCAGTGAAGCGATTCTATCTACAAAT
CCGGCCACCAGAGACCAGCAATCTGCTTCACTTGAGCGAGTGCTTAGACAGTTTGAAGCC
ACCTGCTCACTCTATGCTCGTGAATAAAATCTTGACTTTTTCTGTTTTTCTTTTTATCTT
TTCTCTTGATAGAGTCATTGTGTAAGCTCAAATGTTCTAAAACTAGCGATCATACTTTAA
CTTGATTCACAACAATATAC
GenBank Accession CR358015 [GenBank]
Graphic View Graphic view of gene At4g09200
Predicted Position of Insertion Chr4:5861305 - go to primer design
BLAST e Value 2e-106
Hit Clone Code (BAC ID) T8A17
Hit Gene Code At4g09200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SPla/RYanodine receptor (SPRY) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37