SimpleSearch - Line and FST details


Line specific information

 
Line ID 724B01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N469421)
Segregation Analysis 50:47:42
Confirmed for Hit At5g39730
Parent of DUPLO pair none
Parent of pair(s) 7388, 8514, 9206, 9230, 11558, 77239

Gene hit At5g39730

 
Sequence (A. th genome BLAST matches underlined) 
>02-K025363-022-724-B01-8409
CCATCATATTCTTTTCGTCTATGGTAGCTTTCAAGAGCCTGACATCATCCATGTCATGCT
TAATCGTATTCCTGAGATTGTCTCTGCAACACTTCCTGGCTTGTATGGGATCCTCCCTAT
AGTGAGNAGNAATTATGTTCTTTANTTACAAATTTTTGTCATCATANTAAATTATTTTGC
TAACTTGGCTTTGATAAATAACTCTAGTTTTTTGCCGACAAAAAAAAAAAAAAAACTTCT
TTTTTTTTTTTTTTGGGGAAAATTTTCCCTTTTAAAAAAATAAATGAAAAAAATTTTTCA
AAAGGATTTTAACTTTTTTTAATTTTTAACACATATTTTTTTTTTTTTTTTCTTAAATTG
GCCAATTCCAAAAGGAAAAAAAAAATATTTAAACCCCCCCTTTTGGGTTAGGAACCCCCC
CTAAA
GenBank Accession CR358033 [GenBank]
Graphic View Graphic view of gene At5g39730
Predicted Position of Insertion Chr5:15901776 - go to primer design
BLAST e Value 6e-45
Hit Clone Code (BAC ID) MIJ24
Hit Gene Code At5g39730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AIG2-like (avirulence induced gene) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR358033 [GenBank]


Last Updated on 10.06.2021 13:37